Skip to content

Class: Subject Assertion (SubjectAssertion)

Assertion about a particular Subject. May include Conditions, Measurements, etc.

URI: [includedcc:SubjectAssertion](https://includedcc.org/include-access-model/SubjectAssertion)
classDiagram class SubjectAssertion click SubjectAssertion href "../SubjectAssertion/" Record <|-- SubjectAssertion click Record href "../Record/" SubjectAssertion : access_policy_id SubjectAssertion --> "0..1" AccessPolicy : access_policy_id click AccessPolicy href "../AccessPolicy/" SubjectAssertion : age_at_assertion SubjectAssertion : age_at_event SubjectAssertion : age_at_resolution SubjectAssertion : asserter_type SubjectAssertion --> "0..1" EnumAsserterType : asserter_type click EnumAsserterType href "../EnumAsserterType/" SubjectAssertion : assertion_id SubjectAssertion : assertion_source_type SubjectAssertion --> "0..1" EnumDataSourceType : assertion_source_type click EnumDataSourceType href "../EnumDataSourceType/" SubjectAssertion : concept SubjectAssertion --> "*" Concept : concept click Concept href "../Concept/" SubjectAssertion : concept_source SubjectAssertion : encounter_id SubjectAssertion --> "0..1" Encounter : encounter_id click Encounter href "../Encounter/" SubjectAssertion : external_id SubjectAssertion : study_id SubjectAssertion --> "0..1" Study : study_id click Study href "../Study/" SubjectAssertion : subject_id SubjectAssertion --> "0..1" Subject : subject_id click Subject href "../Subject/" SubjectAssertion : value_concept SubjectAssertion --> "*" Concept : value_concept click Concept href "../Concept/" SubjectAssertion : value_number SubjectAssertion : value_source SubjectAssertion : value_unit SubjectAssertion --> "0..1" Concept : value_unit click Concept href "../Concept/" SubjectAssertion : value_unit_source
## Inheritance * **SubjectAssertion** [ [Record](Record.md)] ## Slots | Name | Cardinality and Range | Description | Inheritance | | --- | --- | --- | --- | | [assertion_id](assertion_id.md) | 1
[String](String.md) or 
[ObGlobalID](ObGlobalID.md) or 
[DeGlobalID](DeGlobalID.md) or 
[MsGlobalID](MsGlobalID.md) | INCLUDE Global ID for the Assertion | direct | | [subject_id](subject_id.md) | 0..1
[Subject](Subject.md) | INCLUDE Global ID for the Subject | direct | | [encounter_id](encounter_id.md) | 0..1
[Encounter](Encounter.md) | Unique identifier for this Encounter | direct | | [asserter_type](asserter_type.md) | 0..1
[EnumAsserterType](EnumAsserterType.md) | The original asserter of this information | direct | | [assertion_source_type](assertion_source_type.md) | 0..1
[EnumDataSourceType](EnumDataSourceType.md) | The source of this assertion from the original data | direct | | [age_at_assertion](age_at_assertion.md) | 0..1
[Integer](Integer.md) | The age in days of the Subject when the assertion was made | direct | | [age_at_event](age_at_event.md) | 0..1
[Integer](Integer.md) | The age in days of the Subject at the time point which the assertion describe... | direct | | [age_at_resolution](age_at_resolution.md) | 0..1
[Integer](Integer.md) | The age in days of the Subject when the asserted state was resolved | direct | | [concept](concept.md) | *
[Concept](Concept.md) | The structured term defining the meaning of the assertion | direct | | [concept_source](concept_source.md) | 0..1
[String](String.md) | The source text yielding the standardized concept | direct | | [value_concept](value_concept.md) | *
[Concept](Concept.md) or 
[EnumPresentAbsent](EnumPresentAbsent.md) | The structured term defining the value of the assertion | direct | | [value_number](value_number.md) | 0..1
[Float](Float.md) | The numeric value of the assertion | direct | | [value_source](value_source.md) | 0..1
[String](String.md) | The source text yielding the value | direct | | [value_unit](value_unit.md) | 0..1
[Concept](Concept.md) | The structured term defining the units of the value | direct | | [value_unit_source](value_unit_source.md) | 0..1
[String](String.md) | The source text yielding the value's units | direct | | [external_id](external_id.md) | *
[Uriorcurie](Uriorcurie.md) | Other identifiers for this entity, eg, from the submitting study or in system... | [Record](Record.md) | | [access_policy_id](access_policy_id.md) | 0..1
[AccessPolicy](AccessPolicy.md) | Global identifier for the access policy that applies to this row of data | [Record](Record.md) | | [study_id](study_id.md) | 0..1
[Study](Study.md) | INCLUDE Global ID for the study | [Record](Record.md) | ## Identifier and Mapping Information ### Schema Source * from schema: https://includedcc.org/include-access-model ## Mappings | Mapping Type | Mapped Value | | --- | --- | | self | includedcc:SubjectAssertion | | native | includedcc:SubjectAssertion | ## LinkML Source ### Direct
name: SubjectAssertion
description: Assertion about a particular Subject. May include Conditions, Measurements,
  etc.
title: Subject Assertion
from_schema: https://includedcc.org/include-access-model
mixins:
- Record
slots:
- assertion_id
- subject_id
- encounter_id
- asserter_type
- assertion_source_type
- age_at_assertion
- age_at_event
- age_at_resolution
- concept
- concept_source
- value_concept
- value_number
- value_source
- value_unit
- value_unit_source
slot_usage:
  assertion_id:
    name: assertion_id
    identifier: true
    range: string
    required: true
    any_of:
    - range: obGlobalID
    - range: deGlobalID
    - range: msGlobalID

### Induced
name: SubjectAssertion
description: Assertion about a particular Subject. May include Conditions, Measurements,
  etc.
title: Subject Assertion
from_schema: https://includedcc.org/include-access-model
mixins:
- Record
slot_usage:
  assertion_id:
    name: assertion_id
    identifier: true
    range: string
    required: true
    any_of:
    - range: obGlobalID
    - range: deGlobalID
    - range: msGlobalID
attributes:
  assertion_id:
    name: assertion_id
    description: INCLUDE Global ID for the Assertion
    title: Assertion ID
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    identifier: true
    owner: SubjectAssertion
    domain_of:
    - SubjectAssertion
    range: string
    required: true
    multivalued: false
    any_of:
    - range: obGlobalID
    - range: deGlobalID
    - range: msGlobalID
  subject_id:
    name: subject_id
    description: INCLUDE Global ID for the Subject
    title: Study ID
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    owner: SubjectAssertion
    domain_of:
    - Subject
    - Demographics
    - FamilyRelationship
    - FamilyMembership
    - SubjectAssertion
    - Encounter
    - File
    - Assay
    range: Subject
    multivalued: false
  encounter_id:
    name: encounter_id
    description: Unique identifier for this Encounter.
    title: Encounter ID
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    owner: SubjectAssertion
    domain_of:
    - SubjectAssertion
    - BiospecimenCollection
    - Encounter
    range: Encounter
  asserter_type:
    name: asserter_type
    description: The original asserter of this information
    title: Asserter Type
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    owner: SubjectAssertion
    domain_of:
    - SubjectAssertion
    range: EnumAsserterType
  assertion_source_type:
    name: assertion_source_type
    description: The source of this assertion from the original data
    title: Assertion Source
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    owner: SubjectAssertion
    domain_of:
    - SubjectAssertion
    range: EnumDataSourceType
  age_at_assertion:
    name: age_at_assertion
    description: The age in days of the Subject when the assertion was made.
    title: Age at assertion
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    owner: SubjectAssertion
    domain_of:
    - SubjectAssertion
    range: integer
    unit:
      ucum_code: d
  age_at_event:
    name: age_at_event
    description: The age in days of the Subject at the time point which the assertion
      describes, eg, age of onset or when a measurement was performed.
    title: Age at event
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    owner: SubjectAssertion
    domain_of:
    - SubjectAssertion
    - Encounter
    range: integer
    unit:
      ucum_code: d
  age_at_resolution:
    name: age_at_resolution
    description: The age in days of the Subject when the asserted state was resolved.
    title: Age at resolution
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    owner: SubjectAssertion
    domain_of:
    - SubjectAssertion
    range: integer
    unit:
      ucum_code: d
  concept:
    name: concept
    description: The structured term defining the meaning of the assertion.
    title: Concept
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    owner: SubjectAssertion
    domain_of:
    - SubjectAssertion
    range: Concept
    multivalued: true
  concept_source:
    name: concept_source
    description: The source text yielding the standardized concept.
    title: Concept Source Text
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    owner: SubjectAssertion
    domain_of:
    - SubjectAssertion
    range: string
  value_concept:
    name: value_concept
    description: The structured term defining the value of the assertion.
    title: Value concept
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    owner: SubjectAssertion
    domain_of:
    - SubjectAssertion
    range: Concept
    multivalued: true
    any_of:
    - range: Concept
    - range: EnumPresentAbsent
  value_number:
    name: value_number
    description: The numeric value of the assertion.
    title: Value Number
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    owner: SubjectAssertion
    domain_of:
    - SubjectAssertion
    range: float
  value_source:
    name: value_source
    description: The source text yielding the value.
    title: Value Source Text
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    owner: SubjectAssertion
    domain_of:
    - SubjectAssertion
    range: string
  value_unit:
    name: value_unit
    description: The structured term defining the units of the value.
    title: Value Units
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    owner: SubjectAssertion
    domain_of:
    - SubjectAssertion
    range: Concept
  value_unit_source:
    name: value_unit_source
    description: The source text yielding the value's units.
    title: Value Units Source Text
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    owner: SubjectAssertion
    domain_of:
    - SubjectAssertion
    range: string
  external_id:
    name: external_id
    description: Other identifiers for this entity, eg, from the submitting study
      or in systems like dbGaP
    title: External Identifiers
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    owner: SubjectAssertion
    domain_of:
    - Record
    range: uriorcurie
    required: false
    multivalued: true
  access_policy_id:
    name: access_policy_id
    description: Global identifier for the access policy that applies to this row
      of data.
    title: Access Policy ID
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    owner: SubjectAssertion
    domain_of:
    - Record
    - AccessPolicy
    range: AccessPolicy
  study_id:
    name: study_id
    description: INCLUDE Global ID for the study
    title: Study ID
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    owner: SubjectAssertion
    domain_of:
    - Record
    - StudyMetadata
    range: Study
    multivalued: false