Class: Study Metadata (StudyMetadata)

Additional features about studies that may not apply to all studies

classDiagram class StudyMetadata click StudyMetadata href "../StudyMetadata/" Record <|-- StudyMetadata click Record href "../Record/" StudyMetadata : actual_number_of_participants StudyMetadata : clinical_data_source_type StudyMetadata --> "1..*" EnumClinicalDataSourceType : clinical_data_source_type click EnumClinicalDataSourceType href "../EnumClinicalDataSourceType/" StudyMetadata : data_category StudyMetadata --> "1..*" EnumDataCategory : data_category click EnumDataCategory href "../EnumDataCategory/" StudyMetadata : expected_number_of_participants StudyMetadata : external_id StudyMetadata : participant_lifespan_stage StudyMetadata --> "1..*" EnumParticipantLifespanStage : participant_lifespan_stage click EnumParticipantLifespanStage href "../EnumParticipantLifespanStage/" StudyMetadata : research_domain StudyMetadata --> "1..*" EnumResearchDomain : research_domain click EnumResearchDomain href "../EnumResearchDomain/" StudyMetadata : selection_criteria StudyMetadata : study_design StudyMetadata --> "1..*" EnumStudyDesign : study_design click EnumStudyDesign href "../EnumStudyDesign/" StudyMetadata : study_id StudyMetadata --> "1" Study : study_id click Study href "../Study/" StudyMetadata : vbr StudyMetadata --> "0..1" VirtualBiorepository : vbr click VirtualBiorepository href "../VirtualBiorepository/"

Inheritance

Record
- StudyMetadata

Slots

Name	Cardinality and Range	Description	Inheritance
study_id	1 Study	INCLUDE Global ID for the study	direct
participant_lifespan_stage	1..* EnumParticipantLifespanStage	Focus age group(s) of the study population	direct
selection_criteria	0..1 String	Brief description of inclusion and/or exclusion criteria for the study	direct
study_design	1..* EnumStudyDesign	Overall design of study, including whether it is longitudinal and whether fam...	direct
clinical_data_source_type	1..* EnumClinicalDataSourceType	Source(s) of data collected from study participants	direct
data_category	1..* EnumDataCategory	General category of data in this Record (e	direct
vbr	0..1 VirtualBiorepository	Information about the study's Virtual Biorepository, if participating	direct
research_domain	1..* EnumResearchDomain	Main research domain(s) of the study, other than Down syndrome	direct
expected_number_of_participants	1 Integer	Total expected number of participants to be recruited	direct
actual_number_of_participants	1 Integer	Total participants included at this time	direct
external_id	* Uriorcurie	Other identifiers for this entity, eg, from the submitting study or in system...	Record

Identifier and Mapping Information

Schema Source

from schema: https://includedcc.org/include-access-model

Mappings

Mapping Type	Mapped Value
self	includedcc:StudyMetadata
native	includedcc:StudyMetadata

LinkML Source

Direct

name: StudyMetadata
description: Additional features about studies that may not apply to all studies
title: Study Metadata
from_schema: https://includedcc.org/include-access-model
is_a: Record
slots:
- study_id
- participant_lifespan_stage
- selection_criteria
- study_design
- clinical_data_source_type
- data_category
- vbr
- research_domain
- expected_number_of_participants
- actual_number_of_participants
slot_usage:
  study_id:
    name: study_id
    identifier: true
    required: true
  data_category:
    name: data_category
    required: true
    multivalued: true

Induced

name: StudyMetadata
description: Additional features about studies that may not apply to all studies
title: Study Metadata
from_schema: https://includedcc.org/include-access-model
is_a: Record
slot_usage:
  study_id:
    name: study_id
    identifier: true
    required: true
  data_category:
    name: data_category
    required: true
    multivalued: true
attributes:
  study_id:
    name: study_id
    description: INCLUDE Global ID for the study
    title: Study ID
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    identifier: true
    alias: study_id
    owner: StudyMetadata
    domain_of:
    - Study
    - StudyMetadata
    range: Study
    required: true
    multivalued: false
  participant_lifespan_stage:
    name: participant_lifespan_stage
    description: Focus age group(s) of the study population
    title: Participant Lifespan Stage
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: participant_lifespan_stage
    owner: StudyMetadata
    domain_of:
    - StudyMetadata
    range: EnumParticipantLifespanStage
    required: true
    multivalued: true
  selection_criteria:
    name: selection_criteria
    description: Brief description of inclusion and/or exclusion criteria for the
      study
    title: Selection Criteria
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: selection_criteria
    owner: StudyMetadata
    domain_of:
    - StudyMetadata
    range: string
  study_design:
    name: study_design
    description: Overall design of study, including whether it is longitudinal and
      whether family members/unrelated controls are also enrolled
    title: Study Design
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: study_design
    owner: StudyMetadata
    domain_of:
    - StudyMetadata
    range: EnumStudyDesign
    required: true
    multivalued: true
  clinical_data_source_type:
    name: clinical_data_source_type
    description: Source(s) of data collected from study participants
    title: Clinical Data Source Type
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: clinical_data_source_type
    owner: StudyMetadata
    domain_of:
    - StudyMetadata
    range: EnumClinicalDataSourceType
    required: true
    multivalued: true
  data_category:
    name: data_category
    description: General category of data in this Record (e.g. Clinical, Genomics,
      etc)
    title: Data Category
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: data_category
    owner: StudyMetadata
    domain_of:
    - StudyMetadata
    - File
    range: EnumDataCategory
    required: true
    multivalued: true
  vbr:
    name: vbr
    description: Information about the study's Virtual Biorepository, if participating
    title: Virtual Biorepository
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: vbr
    owner: StudyMetadata
    domain_of:
    - StudyMetadata
    range: VirtualBiorepository
    required: false
  research_domain:
    name: research_domain
    description: Main research domain(s) of the study, other than Down syndrome
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: research_domain
    owner: StudyMetadata
    domain_of:
    - StudyMetadata
    range: EnumResearchDomain
    required: true
    multivalued: true
  expected_number_of_participants:
    name: expected_number_of_participants
    description: Total expected number of participants to be recruited.
    title: Expected Number of Participants
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: expected_number_of_participants
    owner: StudyMetadata
    domain_of:
    - StudyMetadata
    range: integer
    required: true
  actual_number_of_participants:
    name: actual_number_of_participants
    description: Total participants included at this time.
    title: Actual Number of Participants
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: actual_number_of_participants
    owner: StudyMetadata
    domain_of:
    - StudyMetadata
    range: integer
    required: true
  external_id:
    name: external_id
    description: Other identifiers for this entity, eg, from the submitting study
      or in systems like dbGaP
    title: External Identifiers
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: external_id
    owner: StudyMetadata
    domain_of:
    - Record
    range: uriorcurie
    required: false
    multivalued: true