Class: Study (Study)

Study Metadata

classDiagram class Study click Study href "../Study/" Record <|-- Study click Record href "../Record/" Study : acknowledgments Study : actual_number_of_participants Study : citation_statement Study : clinical_data_source_type Study --> "1..*" EnumClinicalDataSourceType : clinical_data_source_type click EnumClinicalDataSourceType href "../EnumClinicalDataSourceType/" Study : contact Study --> "1..*" Investigator : contact click Investigator href "../Investigator/" Study : data_category Study --> "1..*" EnumDataCategory : data_category click EnumDataCategory href "../EnumDataCategory/" Study : doi Study : expected_number_of_participants Study : external_id Study : funding_source Study : parent_study Study --> "0..1" Study : parent_study click Study href "../Study/" Study : participant_lifespan_stage Study --> "1..*" EnumParticipantLifespanStage : participant_lifespan_stage click EnumParticipantLifespanStage href "../EnumParticipantLifespanStage/" Study : principal_investigator Study --> "1..*" Investigator : principal_investigator click Investigator href "../Investigator/" Study : program Study --> "1..*" EnumProgram : program click EnumProgram href "../EnumProgram/" Study : publication Study --> "*" Publication : publication click Publication href "../Publication/" Study : research_domain Study --> "1..*" EnumResearchDomain : research_domain click EnumResearchDomain href "../EnumResearchDomain/" Study : selection_criteria Study : study_code Study : study_description Study : study_design Study --> "1..*" EnumStudyDesign : study_design click EnumStudyDesign href "../EnumStudyDesign/" Study : study_id Study : study_short_name Study : study_title Study : vbr Study --> "0..1" VirtualBiorepository : vbr click VirtualBiorepository href "../VirtualBiorepository/" Study : website

Inheritance

Record
- Study

Slots

Name	Cardinality and Range	Description	Inheritance
study_id	1 String	INLCUDE Global ID for the study	direct
parent_study	0..1 Study	The parent study for this study, if it is a nested study	direct
funding_source	* String	The funding source(s) of the study	direct
principal_investigator	1..* Investigator	The Principal Investigator(s) responsible for the study	direct
contact	1..* Investigator	The individual to contact with questions about this record	direct
study_title	1 String	Full Study Title	direct
study_code	1 String	Unique identifier for the study (generally a short acronym)	direct
study_short_name	0..1 String	Short name for the study	direct
program	1..* EnumProgram	Funding source(s) for the study	direct
study_description	1 String	Brief description of the study (2-4 sentences)	direct
vbr	0..1 VirtualBiorepository	Information about the study's Virtual Biorepository, if participating	direct
research_domain	1..* EnumResearchDomain	Main research domain(s) of the study, other than Down syndrome	direct
participant_lifespan_stage	1..* EnumParticipantLifespanStage	Focus age group(s) of the study population	direct
selection_criteria	0..1 String	Brief description of inclusion and/or exclusion criteria for the study	direct
study_design	1..* EnumStudyDesign	Overall design of study, including whether it is longitudinal and whether fam...	direct
clinical_data_source_type	1..* EnumClinicalDataSourceType	Source(s) of data collected from study participants	direct
data_category	1..* EnumDataCategory	General category of data in this Record (e	direct
website	0..1 Uri	Website for the Record	direct
publication	* Publication	Publications associated with this Record	direct
expected_number_of_participants	1 Integer	Total expected number of participants to be recruited	direct
actual_number_of_participants	1 Integer	Total participants included at this time	direct
acknowledgments	0..1 String	Funding statement and acknowledgments for this study	direct
citation_statement	0..1 String	Statement that secondary data users should use to acknowledge use of this stu...	direct
doi	0..1 Uri	Digital Object Identifier (DOI) for this Record	direct
external_id	* Uriorcurie	Other identifiers for this entity, eg, from the submitting study or in system...	Record

Usages

used by	used in	type	used
Study	parent_study	range	Study

Identifier and Mapping Information

Schema Source

from schema: https://includedcc.org/include-access-model

Mappings

Mapping Type	Mapped Value
self	includedcc:Study
native	includedcc:Study

LinkML Source

Direct

name: Study
description: Study Metadata
title: Study
from_schema: https://includedcc.org/include-access-model
is_a: Record
slots:
- study_id
- parent_study
- funding_source
- principal_investigator
- contact
- study_title
- study_code
- study_short_name
- program
- study_description
- vbr
- research_domain
- participant_lifespan_stage
- selection_criteria
- study_design
- clinical_data_source_type
- data_category
- website
- publication
- expected_number_of_participants
- actual_number_of_participants
- acknowledgments
- citation_statement
- doi
slot_usage:
  study_id:
    name: study_id
    identifier: true
    required: true

Induced

name: Study
description: Study Metadata
title: Study
from_schema: https://includedcc.org/include-access-model
is_a: Record
slot_usage:
  study_id:
    name: study_id
    identifier: true
    required: true
attributes:
  study_id:
    name: study_id
    description: INLCUDE Global ID for the study
    title: Study ID
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    identifier: true
    alias: study_id
    owner: Study
    domain_of:
    - Study
    range: string
    required: true
    multivalued: false
  parent_study:
    name: parent_study
    description: The parent study for this study, if it is a nested study.
    title: Parent Study
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: parent_study
    owner: Study
    domain_of:
    - Study
    range: Study
    required: false
    multivalued: false
  funding_source:
    name: funding_source
    description: The funding source(s) of the study.
    title: Funding Source
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: funding_source
    owner: Study
    domain_of:
    - Study
    range: string
    required: false
    multivalued: true
  principal_investigator:
    name: principal_investigator
    description: The Principal Investigator(s) responsible for the study.
    title: Principal Investigator
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: principal_investigator
    owner: Study
    domain_of:
    - Study
    range: Investigator
    required: true
    multivalued: true
  contact:
    name: contact
    description: The individual to contact with questions about this record.
    title: Contact Person
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: contact
    owner: Study
    domain_of:
    - Study
    - VirtualBiorepository
    range: Investigator
    required: true
    multivalued: true
  study_title:
    name: study_title
    description: Full Study Title
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: study_title
    owner: Study
    domain_of:
    - Study
    range: string
    required: true
    multivalued: false
  study_code:
    name: study_code
    description: Unique identifier for the study (generally a short acronym)
    title: Study Code
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: study_code
    owner: Study
    domain_of:
    - Study
    range: string
    required: true
  study_short_name:
    name: study_short_name
    description: Short name for the study
    title: Study Code
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: study_short_name
    owner: Study
    domain_of:
    - Study
    range: string
    required: false
  program:
    name: program
    description: Funding source(s) for the study
    title: Program
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: program
    owner: Study
    domain_of:
    - Study
    range: EnumProgram
    required: true
    multivalued: true
  study_description:
    name: study_description
    description: Brief description of the study (2-4 sentences)
    title: Study Description
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: study_description
    owner: Study
    domain_of:
    - Study
    range: string
    required: true
  vbr:
    name: vbr
    description: Information about the study's Virtual Biorepository, if participating
    title: Virtual Biorepository
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: vbr
    owner: Study
    domain_of:
    - Study
    range: VirtualBiorepository
    required: false
  research_domain:
    name: research_domain
    description: Main research domain(s) of the study, other than Down syndrome
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: research_domain
    owner: Study
    domain_of:
    - Study
    range: EnumResearchDomain
    required: true
    multivalued: true
  participant_lifespan_stage:
    name: participant_lifespan_stage
    description: Focus age group(s) of the study population
    title: Participant Lifespan Stage
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: participant_lifespan_stage
    owner: Study
    domain_of:
    - Study
    range: EnumParticipantLifespanStage
    required: true
    multivalued: true
  selection_criteria:
    name: selection_criteria
    description: Brief description of inclusion and/or exclusion criteria for the
      study
    title: Selection Criteria
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: selection_criteria
    owner: Study
    domain_of:
    - Study
    range: string
  study_design:
    name: study_design
    description: Overall design of study, including whether it is longitudinal and
      whether family members/unrelated controls are also enrolled
    title: Study Design
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: study_design
    owner: Study
    domain_of:
    - Study
    range: EnumStudyDesign
    required: true
    multivalued: true
  clinical_data_source_type:
    name: clinical_data_source_type
    description: Source(s) of data collected from study participants
    title: Clinical Data Source Type
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: clinical_data_source_type
    owner: Study
    domain_of:
    - Study
    range: EnumClinicalDataSourceType
    required: true
    multivalued: true
  data_category:
    name: data_category
    description: General category of data in this Record (e.g. Clinical, Genomics,
      etc)
    title: Data Category
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: data_category
    owner: Study
    domain_of:
    - Study
    range: EnumDataCategory
    required: true
    multivalued: true
  website:
    name: website
    description: Website for the Record.
    title: Website
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: website
    owner: Study
    domain_of:
    - Study
    - VirtualBiorepository
    - Publication
    range: uri
  publication:
    name: publication
    description: Publications associated with this Record.
    title: Publication
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: publication
    owner: Study
    domain_of:
    - Study
    range: Publication
    multivalued: true
  expected_number_of_participants:
    name: expected_number_of_participants
    description: Total expected number of participants to be recruited.
    title: Expected Number of Participants
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: expected_number_of_participants
    owner: Study
    domain_of:
    - Study
    range: integer
    required: true
  actual_number_of_participants:
    name: actual_number_of_participants
    description: Total participants included at this time.
    title: Actual Number of Participants
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: actual_number_of_participants
    owner: Study
    domain_of:
    - Study
    range: integer
    required: true
  acknowledgments:
    name: acknowledgments
    description: Funding statement and acknowledgments for this study
    title: Acknowledgments
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: acknowledgments
    owner: Study
    domain_of:
    - Study
    range: string
  citation_statement:
    name: citation_statement
    description: Statement that secondary data users should use to acknowledge use
      of this study or dataset. E.g., "The results analyzed and <published or shown>
      here are based in whole or in part upon data generated by the INCLUDE (INvestigation
      of Co-occurring conditions across the Lifespan to Understand Down syndromE)
      Project <insert accession number(s) and/or study DOI(s)>, and were accessed
      from the INCLUDE Data Hub and <insert other database(s)>."
    title: Citation Statement
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: citation_statement
    owner: Study
    domain_of:
    - Study
    range: string
  doi:
    name: doi
    description: Digital Object Identifier (DOI) for this Record.
    title: DOI
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: doi
    owner: Study
    domain_of:
    - Study
    - DOI
    range: uri
    multivalued: false
  external_id:
    name: external_id
    description: Other identifiers for this entity, eg, from the submitting study
      or in systems like dbGaP
    title: External Identifiers
    from_schema: https://includedcc.org/include-access-model
    rank: 1000
    alias: external_id
    owner: Study
    domain_of:
    - Record
    range: uriorcurie
    required: false
    multivalued: true