Enum: EnumEDAMDataTypes

Data types from the EDAM ontology.

URI: cam:EnumEDAMDataTypes

Enumeration Source

Reachable From: - Source: NONE - Nodes: edam:data_0006 - Via: rdfs:subClassOf

Permissible Values

Value	Meaning	Description	Additional Info
edam:data_0582	edam:data_0582	An ontology of biological or bioinformatics concepts and relations, a control...	Title: Ontology
edam:data_0842	edam:data_0842	A text token, number or something else which identifies an entity, but which ...	Title: Identifier
edam:data_0844	edam:data_0844	Mass of a molecule	Title: Molecular mass
edam:data_0845	edam:data_0845	Net charge of a molecule	Title: Molecular charge
edam:data_0846	edam:data_0846	A specification of a chemical structure	Title: Chemical formula
edam:data_0847	edam:data_0847	A QSAR quantitative descriptor (name-value pair) of chemical structure	Title: QSAR descriptor
edam:data_0849	edam:data_0849	A molecular sequence and associated metadata	Title: Sequence record
edam:data_0850	edam:data_0850	A collection of one or typically multiple molecular sequences (which can incl...	Title: Sequence set
edam:data_0856	edam:data_0856	How the annotation of a sequence feature (for example in EMBL or Swiss-Prot) ...	Title: Sequence feature source
edam:data_0857	edam:data_0857	A report of sequence hits and associated data from searching a database of se...	Title: Sequence search results
edam:data_0858	edam:data_0858	A "profile-profile alignment" is an alignment of two sequence profiles, each ...	Title: Sequence signature matches
edam:data_0860	edam:data_0860	Sequence signature data concerns specific or conserved pattern in molecular s...	Title: Sequence signature data
edam:data_0862	edam:data_0862	A dotplot of sequence similarities identified from word-matching or character...	Title: Dotplot
edam:data_0863	edam:data_0863	Alignment of multiple molecular sequences	Title: Sequence alignment
edam:data_0865	edam:data_0865	A value representing molecular sequence similarity	Title: Sequence similarity score
edam:data_0867	edam:data_0867	An informative report of molecular sequence alignment-derived data or metadat...	Title: Sequence alignment report
edam:data_0870	edam:data_0870	A matrix of estimated evolutionary distance between molecular sequences, such...	Title: Sequence distance matrix
edam:data_0871	edam:data_0871	As defined, this concept would also include molecular sequences, microsatelli...	Title: Phylogenetic character data
edam:data_0872	edam:data_0872	A phylogenetic tree is usually constructed from a set of sequences from which...	Title: Phylogenetic tree
edam:data_0874	edam:data_0874	Matrix of integer or floating point numbers for amino acid or nucleotide sequ...	Title: Comparison matrix
edam:data_0878	edam:data_0878	Alignment of the (1D representations of) secondary structure of two or more p...	Title: Protein secondary structure alignment
edam:data_0880	edam:data_0880	An informative report of secondary structure (predicted or real) of an RNA mo...	Title: RNA secondary structure
edam:data_0881	edam:data_0881	Alignment of the (1D representations of) secondary structure of two or more R...	Title: RNA secondary structure alignment
edam:data_0883	edam:data_0883	3D coordinate and associated data for a macromolecular tertiary (3D) structur...	Title: Structure
edam:data_0886	edam:data_0886	A tertiary structure alignment will include the untransformed coordinates of ...	Title: Structure alignment
edam:data_0887	edam:data_0887	An informative report of molecular tertiary structure alignment-derived data	Title: Structure alignment report
edam:data_0888	edam:data_0888	A value representing molecular structure similarity, measured from structure ...	Title: Structure similarity score
edam:data_0889	edam:data_0889	Some type of structural (3D) profile or template (representing a structure or...	Title: Structural profile
edam:data_0890	edam:data_0890	A 3D profile-3D profile alignment (each profile representing structures or a ...	Title: Structural (3D) profile alignment
edam:data_0892	edam:data_0892	Matrix of values used for scoring sequence-structure compatibility	Title: Protein sequence-structure scoring matrix
edam:data_0893	edam:data_0893	An alignment of molecular sequence to structure (from threading sequence(s) t...	Title: Sequence-structure alignment
edam:data_0896	edam:data_0896	An informative human-readable report about one or more specific protein molec...	Title: Protein report
edam:data_0897	edam:data_0897	A report of primarily non-positional data describing intrinsic physical, chem...	Title: Protein property
edam:data_0905	edam:data_0905	Protein-protein interaction data from for example yeast two-hybrid analysis, ...	Title: Protein interaction raw data
edam:data_0906	edam:data_0906	Data concerning the interactions (predicted or known) within or between a pro...	Title: Protein interaction data
edam:data_0907	edam:data_0907	An informative report on a specific protein family or other classification or...	Title: Protein family report
edam:data_0909	edam:data_0909	The maximum initial velocity or rate of a reaction	Title: Vmax
edam:data_0910	edam:data_0910	Km is the concentration (usually in Molar units) of substrate that leads to h...	Title: Km
edam:data_0912	edam:data_0912	A report of primarily non-positional data describing intrinsic physical, chem...	Title: Nucleic acid property
edam:data_0914	edam:data_0914	Data derived from analysis of codon usage (typically a codon usage table) of ...	Title: Codon usage data
edam:data_0916	edam:data_0916	A report on predicted or actual gene structure, regions which make an RNA pro...	Title: Gene report
edam:data_0919	edam:data_0919	A human-readable collection of information about a specific chromosome	Title: Chromosome report
edam:data_0920	edam:data_0920	A human-readable collection of information about the set of genes (or allelic...	Title: Genotype/phenotype report
edam:data_0924	edam:data_0924	Fluorescence trace data generated by an automated DNA sequencer, which can be...	Title: Sequence trace
edam:data_0925	edam:data_0925	An assembly of fragments of a (typically genomic) DNA sequence	Title: Sequence assembly
edam:data_0926	edam:data_0926	Radiation Hybrid (RH) scores are used in Radiation Hybrid mapping	Title: RH scores
edam:data_0927	edam:data_0927	A human-readable collection of information about the linkage of alleles	Title: Genetic linkage report
edam:data_0928	edam:data_0928	Data quantifying the level of expression of (typically) multiple genes, deriv...	Title: Gene expression profile
edam:data_0937	edam:data_0937	X-ray crystallography data	Title: Electron density map
edam:data_0938	edam:data_0938	Nuclear magnetic resonance (NMR) raw data, typically for a protein	Title: Raw NMR data
edam:data_0939	edam:data_0939	Protein secondary structure from protein coordinate or circular dichroism (CD...	Title: CD spectra
edam:data_0940	edam:data_0940	Volume map data from electron microscopy	Title: Volume map
edam:data_0942	edam:data_0942	Two-dimensional gel electrophoresis image	Title: 2D PAGE image
edam:data_0943	edam:data_0943	Spectra from mass spectrometry	Title: Mass spectrum
edam:data_0944	edam:data_0944	A molecular weight standard fingerprint is standard protonated molecular mass...	Title: Peptide mass fingerprint
edam:data_0945	edam:data_0945	Protein or peptide identifications with evidence supporting the identificatio...	Title: Peptide identification
edam:data_0949	edam:data_0949	Basic information, annotation or documentation concerning a workflow (but not...	Title: Workflow metadata
edam:data_0950	edam:data_0950	A biological model represented in mathematical terms	Title: Mathematical model
edam:data_0951	edam:data_0951	A value representing estimated statistical significance of some observed data...	Title: Statistical estimate score
edam:data_0954	edam:data_0954	A mapping of the accession numbers (or other database identifier) of entries ...	Title: Database cross-mapping
edam:data_0955	edam:data_0955	An index of data of biological relevance	Title: Data index
edam:data_0956	edam:data_0956	A human-readable collection of information concerning an analysis of an index...	Title: Data index report
edam:data_0957	edam:data_0957	Basic information on bioinformatics database(s) or other data sources such as...	Title: Database metadata
edam:data_0958	edam:data_0958	Basic information about one or more bioinformatics applications or packages, ...	Title: Tool metadata
edam:data_0960	edam:data_0960	Textual metadata on a software author or end-user, for example a person or ot...	Title: User metadata
edam:data_0962	edam:data_0962	A human-readable collection of information about a specific chemical compound	Title: Small molecule report
edam:data_0963	edam:data_0963	A human-readable collection of information about a particular strain of organ...	Title: Cell line report
edam:data_0966	edam:data_0966	A term (name) from an ontology	Title: Ontology term
edam:data_0967	edam:data_0967	Data concerning or derived from a concept from a biological ontology	Title: Ontology concept data
edam:data_0968	edam:data_0968	Boolean operators (AND, OR and NOT) and wildcard characters may be allowed	Title: Keyword
edam:data_0970	edam:data_0970	A bibliographic reference might include information such as authors, title, j...	Title: Citation
edam:data_0971	edam:data_0971	A scientific text, typically a full text article from a scientific journal	Title: Article
edam:data_0972	edam:data_0972	A human-readable collection of information resulting from text mining	Title: Text mining report
edam:data_0976	edam:data_0976	An identifier that identifies a particular type of data	Title: Identifier (by type of entity)
edam:data_0977	edam:data_0977	An identifier of a bioinformatics tool, e	Title: Tool identifier
edam:data_0982	edam:data_0982	Name or other identifier of a molecule	Title: Molecule identifier
edam:data_0983	edam:data_0983	Identifier (e	Title: Atom ID
edam:data_0984	edam:data_0984	Name of a specific molecule	Title: Molecule name
edam:data_0987	edam:data_0987	Name of a chromosome	Title: Chromosome name
edam:data_0988	edam:data_0988	Identifier of a peptide chain	Title: Peptide identifier
edam:data_0989	edam:data_0989	Identifier of a protein	Title: Protein identifier
edam:data_0990	edam:data_0990	Unique name of a chemical compound	Title: Compound name
edam:data_0991	edam:data_0991	Unique registry number of a chemical compound	Title: Chemical registry number
edam:data_0993	edam:data_0993	Identifier of a drug	Title: Drug identifier
edam:data_0994	edam:data_0994	Identifier of an amino acid	Title: Amino acid identifier
edam:data_0995	edam:data_0995	Name or other identifier of a nucleotide	Title: Nucleotide identifier
edam:data_0996	edam:data_0996	Identifier of a monosaccharide	Title: Monosaccharide identifier
edam:data_0997	edam:data_0997	This is the recommended chemical name for use for example in database annotat...	Title: Chemical name (ChEBI)
edam:data_0998	edam:data_0998	IUPAC recommended name of a chemical compound	Title: Chemical name (IUPAC)
edam:data_0999	edam:data_0999	International Non-proprietary Name (INN or 'generic name') of a chemical comp...	Title: Chemical name (INN)
edam:data_1000	edam:data_1000	Brand name of a chemical compound	Title: Chemical name (brand)
edam:data_1001	edam:data_1001	Synonymous name of a chemical compound	Title: Chemical name (synonymous)
edam:data_1002	edam:data_1002	CAS registry number of a chemical compound; a unique numerical identifier of ...	Title: CAS number
edam:data_1003	edam:data_1003	Beilstein registry number of a chemical compound	Title: Chemical registry number (Beilstein)
edam:data_1004	edam:data_1004	Gmelin registry number of a chemical compound	Title: Chemical registry number (Gmelin)
edam:data_1005	edam:data_1005	3-letter code word for a ligand (HET group) from a PDB file, for example ATP	Title: HET group name
edam:data_1006	edam:data_1006	String of one or more ASCII characters representing an amino acid	Title: Amino acid name
edam:data_1007	edam:data_1007	String of one or more ASCII characters representing a nucleotide	Title: Nucleotide code
edam:data_1008	edam:data_1008	Identifier of a polypeptide chain from a protein	Title: Polypeptide chain ID
edam:data_1009	edam:data_1009	Name of a protein	Title: Protein name
edam:data_1010	edam:data_1010	Name or other identifier of an enzyme or record from a database of enzymes	Title: Enzyme identifier
edam:data_1011	edam:data_1011	An Enzyme Commission (EC) number of an enzyme	Title: EC number
edam:data_1012	edam:data_1012	Name of an enzyme	Title: Enzyme name
edam:data_1013	edam:data_1013	Name of a restriction enzyme	Title: Restriction enzyme name
edam:data_1015	edam:data_1015	A unique identifier of molecular sequence feature, for example an ID of a fea...	Title: Sequence feature ID
edam:data_1016	edam:data_1016	A position of one or more points (base or residue) in a sequence, or part of ...	Title: Sequence position
edam:data_1017	edam:data_1017	Specification of range(s) of sequence positions	Title: Sequence range
edam:data_1020	edam:data_1020	A feature key indicates the biological nature of the feature or information a...	Title: Sequence feature key
edam:data_1021	edam:data_1021	Feature qualifiers hold information about a feature beyond that provided by t...	Title: Sequence feature qualifier
edam:data_1022	edam:data_1022	A feature label identifies a feature of a sequence database entry	Title: Sequence feature label
edam:data_1023	edam:data_1023	The name of a sequence feature-containing entity adhering to the standard fea...	Title: EMBOSS Uniform Feature Object
edam:data_1025	edam:data_1025	An identifier of a gene, such as a name/symbol or a unique identifier of a ge...	Title: Gene identifier
edam:data_1026	edam:data_1026	The short name of a gene; a single word that does not contain white space cha...	Title: Gene symbol
edam:data_1027	edam:data_1027	An NCBI unique identifier of a gene	Title: Gene ID (NCBI)
edam:data_1031	edam:data_1031	Identifier of a gene or feature from the CGD database	Title: Gene ID (CGD)
edam:data_1032	edam:data_1032	Identifier of a gene from DictyBase	Title: Gene ID (DictyBase)
edam:data_1033	edam:data_1033	Unique identifier for a gene (or other feature) from the Ensembl database	Title: Ensembl gene ID
edam:data_1034	edam:data_1034	Identifier of an entry from the SGD database	Title: Gene ID (SGD)
edam:data_1035	edam:data_1035	Identifier of a gene from the GeneDB database	Title: Gene ID (GeneDB)
edam:data_1036	edam:data_1036	Identifier of an entry from the TIGR database	Title: TIGR identifier
edam:data_1037	edam:data_1037	Identifier of an gene from the TAIR database	Title: TAIR accession (gene)
edam:data_1038	edam:data_1038	Identifier of a protein structural domain	Title: Protein domain ID
edam:data_1039	edam:data_1039	Identifier of a protein domain (or other node) from the SCOP database	Title: SCOP domain identifier
edam:data_1040	edam:data_1040	Identifier of a protein domain from CATH	Title: CATH domain ID
edam:data_1041	edam:data_1041	A SCOP concise classification string (sccs) is a compact representation of a ...	Title: SCOP concise classification string (sccs)
edam:data_1042	edam:data_1042	A sunid uniquely identifies an entry in the SCOP hierarchy, including leaves ...	Title: SCOP sunid
edam:data_1043	edam:data_1043	A code number identifying a node from the CATH database	Title: CATH node ID
edam:data_1044	edam:data_1044	The name of a biological kingdom (Bacteria, Archaea, or Eukaryotes)	Title: Kingdom name
edam:data_1045	edam:data_1045	The name of a species (typically a taxonomic group) of organism	Title: Species name
edam:data_1046	edam:data_1046	The name of a strain of an organism variant, typically a plant, virus or bact...	Title: Strain name
edam:data_1047	edam:data_1047	A string of characters that name or otherwise identify a resource on the Inte...	Title: URI
edam:data_1048	edam:data_1048	An identifier of a biological or bioinformatics database	Title: Database ID
edam:data_1049	edam:data_1049	The name of a directory	Title: Directory name
edam:data_1050	edam:data_1050	The name (or part of a name) of a file (of any type)	Title: File name
edam:data_1051	edam:data_1051	Name of an ontology of biological or bioinformatics concepts and relations	Title: Ontology name
edam:data_1052	edam:data_1052	A Uniform Resource Locator (URL)	Title: URL
edam:data_1053	edam:data_1053	A Uniform Resource Name (URN)	Title: URN
edam:data_1055	edam:data_1055	A Life Science Identifier (LSID) - a unique identifier of some data	Title: LSID
edam:data_1056	edam:data_1056	The name of a biological or bioinformatics database	Title: Database name
edam:data_1058	edam:data_1058	The name of a file (of any type) with restricted possible values	Title: Enumerated file name
edam:data_1059	edam:data_1059	A file extension is the characters appearing after the final '	Title: File name extension
edam:data_1060	edam:data_1060	A file base name is the file name stripped of its directory specification and...	Title: File base name
edam:data_1061	edam:data_1061	Name of a QSAR descriptor	Title: QSAR descriptor name
edam:data_1063	edam:data_1063	An identifier of molecular sequence(s) or entries from a molecular sequence d...	Title: Sequence identifier
edam:data_1064	edam:data_1064	An identifier of a set of molecular sequence(s)	Title: Sequence set ID
edam:data_1066	edam:data_1066	Identifier of a molecular sequence alignment, for example a record from an al...	Title: Sequence alignment ID
edam:data_1068	edam:data_1068	Identifier of a phylogenetic tree for example from a phylogenetic tree databa...	Title: Phylogenetic tree ID
edam:data_1069	edam:data_1069	An identifier of a comparison matrix	Title: Comparison matrix identifier
edam:data_1070	edam:data_1070	A unique and persistent identifier of a molecular tertiary structure, typical...	Title: Structure ID
edam:data_1071	edam:data_1071	Identifier or name of a structural (3D) profile or template (representing a s...	Title: Structural (3D) profile ID
edam:data_1072	edam:data_1072	Identifier of an entry from a database of tertiary structure alignments	Title: Structure alignment ID
edam:data_1073	edam:data_1073	Identifier of an index of amino acid physicochemical and biochemical property...	Title: Amino acid index ID
edam:data_1074	edam:data_1074	Identifier of a report of protein interactions from a protein interaction dat...	Title: Protein interaction ID
edam:data_1075	edam:data_1075	Identifier of a protein family	Title: Protein family identifier
edam:data_1076	edam:data_1076	Unique name of a codon usage table	Title: Codon usage table name
edam:data_1077	edam:data_1077	Identifier of a transcription factor (or a TF binding site)	Title: Transcription factor identifier
edam:data_1078	edam:data_1078	Identifier of an entry from a database of microarray data	Title: Experiment annotation ID
edam:data_1079	edam:data_1079	Identifier of an entry from a database of electron microscopy data	Title: Electron microscopy model ID
edam:data_1080	edam:data_1080	Accession of a report of gene expression (e	Title: Gene expression report ID
edam:data_1081	edam:data_1081	Identifier of an entry from a database of genotypes and phenotypes	Title: Genotype and phenotype annotation ID
edam:data_1082	edam:data_1082	Identifier of an entry from a database of biological pathways or networks	Title: Pathway or network identifier
edam:data_1083	edam:data_1083	Identifier of a biological or biomedical workflow, typically from a database ...	Title: Workflow ID
edam:data_1084	edam:data_1084	Identifier of a data type definition from some provider	Title: Data resource definition ID
edam:data_1085	edam:data_1085	Identifier of a mathematical model, typically an entry from a database	Title: Biological model ID
edam:data_1086	edam:data_1086	Identifier of an entry from a database of chemicals	Title: Compound identifier
edam:data_1087	edam:data_1087	A unique (typically numerical) identifier of a concept in an ontology of biol...	Title: Ontology concept ID
edam:data_1088	edam:data_1088	Unique identifier of a scientific article	Title: Article ID
edam:data_1089	edam:data_1089	Identifier of an object from the FlyBase database	Title: FlyBase ID
edam:data_1091	edam:data_1091	Name of an object from the WormBase database, usually a human-readable name	Title: WormBase name
edam:data_1092	edam:data_1092	A WormBase class describes the type of object such as 'sequence' or 'protein'	Title: WormBase class
edam:data_1093	edam:data_1093	A persistent, unique identifier of a molecular sequence database entry	Title: Sequence accession
edam:data_1095	edam:data_1095	The name of a sequence-based entity adhering to the standard sequence naming ...	Title: EMBOSS Uniform Sequence Address
edam:data_1096	edam:data_1096	Accession number of a protein sequence database entry	Title: Sequence accession (protein)
edam:data_1097	edam:data_1097	Accession number of a nucleotide sequence database entry	Title: Sequence accession (nucleic acid)
edam:data_1098	edam:data_1098	Accession number of a RefSeq database entry	Title: RefSeq accession
edam:data_1100	edam:data_1100	An identifier of PIR sequence database entry	Title: PIR identifier
edam:data_1102	edam:data_1102	Primary identifier of a Gramene database entry	Title: Gramene primary identifier
edam:data_1103	edam:data_1103	Identifier of a (nucleic acid) entry from the EMBL/GenBank/DDBJ databases	Title: EMBL/GenBank/DDBJ ID
edam:data_1104	edam:data_1104	A unique identifier of an entry (gene cluster) from the NCBI UniGene database	Title: Sequence cluster ID (UniGene)
edam:data_1105	edam:data_1105	Identifier of a dbEST database entry	Title: dbEST accession
edam:data_1106	edam:data_1106	Identifier of a dbSNP database entry	Title: dbSNP ID
edam:data_1112	edam:data_1112	An identifier of a cluster of molecular sequence(s)	Title: Sequence cluster ID
edam:data_1113	edam:data_1113	Unique identifier of an entry from the COG database	Title: Sequence cluster ID (COG)
edam:data_1114	edam:data_1114	Identifier of a sequence motif, for example an entry from a motif database	Title: Sequence motif identifier
edam:data_1115	edam:data_1115	A sequence profile typically represents a sequence alignment	Title: Sequence profile ID
edam:data_1116	edam:data_1116	Identifier of an entry from the ELMdb database of protein functional sites	Title: ELM ID
edam:data_1117	edam:data_1117	Accession number of an entry from the Prosite database	Title: Prosite accession number
edam:data_1118	edam:data_1118	Unique identifier or name of a HMMER hidden Markov model	Title: HMMER hidden Markov model ID
edam:data_1119	edam:data_1119	Unique identifier or name of a profile from the JASPAR database	Title: JASPAR profile ID
edam:data_1123	edam:data_1123	Accession number of an entry from the TreeBASE database	Title: TreeBASE study accession number
edam:data_1124	edam:data_1124	Accession number of an entry from the TreeFam database	Title: TreeFam accession number
edam:data_1126	edam:data_1126	See for example http://www	Title: Comparison matrix name
edam:data_1127	edam:data_1127	A PDB identification code which consists of 4 characters, the first of which ...	Title: PDB ID
edam:data_1128	edam:data_1128	Identifier of an entry from the AAindex database	Title: AAindex ID
edam:data_1129	edam:data_1129	Accession number of an entry from the BIND database	Title: BIND accession number
edam:data_1130	edam:data_1130	Accession number of an entry from the IntAct database	Title: IntAct accession number
edam:data_1131	edam:data_1131	Name of a protein family	Title: Protein family name
edam:data_1132	edam:data_1132	Name of an InterPro entry, usually indicating the type of protein matches for...	Title: InterPro entry name
edam:data_1133	edam:data_1133	Every InterPro entry has a unique accession number to provide a persistent ci...	Title: InterPro accession
edam:data_1134	edam:data_1134	Secondary accession number of an InterPro entry	Title: InterPro secondary accession
edam:data_1135	edam:data_1135	Unique identifier of an entry from the Gene3D database	Title: Gene3D ID
edam:data_1136	edam:data_1136	Unique identifier of an entry from the PIRSF database	Title: PIRSF ID
edam:data_1137	edam:data_1137	The unique identifier of an entry in the PRINTS database	Title: PRINTS code
edam:data_1138	edam:data_1138	Accession number of a Pfam entry	Title: Pfam accession number
edam:data_1139	edam:data_1139	Accession number of an entry from the SMART database	Title: SMART accession number
edam:data_1140	edam:data_1140	Unique identifier (number) of a hidden Markov model from the Superfamily data...	Title: Superfamily hidden Markov model number
edam:data_1141	edam:data_1141	Accession number of an entry (family) from the TIGRFam database	Title: TIGRFam ID
edam:data_1142	edam:data_1142	A ProDom domain family accession number	Title: ProDom accession number
edam:data_1143	edam:data_1143	Identifier of an entry from the TRANSFAC database	Title: TRANSFAC accession number
edam:data_1144	edam:data_1144	Accession number of an entry from the ArrayExpress database	Title: ArrayExpress accession number
edam:data_1145	edam:data_1145	PRIDE experiment accession number	Title: PRIDE experiment accession number
edam:data_1146	edam:data_1146	Identifier of an entry from the EMDB electron microscopy database	Title: EMDB ID
edam:data_1147	edam:data_1147	Accession number of an entry from the GEO database	Title: GEO accession number
edam:data_1148	edam:data_1148	Identifier of an entry from the GermOnline database	Title: GermOnline ID
edam:data_1149	edam:data_1149	Identifier of an entry from the EMAGE database	Title: EMAGE ID
edam:data_1150	edam:data_1150	Accession number of an entry from a database of disease	Title: Disease ID
edam:data_1151	edam:data_1151	Identifier of an entry from the HGVbase database	Title: HGVbase ID
edam:data_1153	edam:data_1153	Identifier of an entry from the OMIM database	Title: OMIM ID
edam:data_1154	edam:data_1154	Unique identifier of an object from one of the KEGG databases (excluding the ...	Title: KEGG object identifier
edam:data_1155	edam:data_1155	Identifier of an entry from the Reactome database	Title: Pathway ID (reactome)
edam:data_1157	edam:data_1157	Identifier of an pathway from the BioCyc biological pathways database	Title: Pathway ID (BioCyc)
edam:data_1158	edam:data_1158	Identifier of an entry from the INOH database	Title: Pathway ID (INOH)
edam:data_1159	edam:data_1159	Identifier of an entry from the PATIKA database	Title: Pathway ID (PATIKA)
edam:data_1160	edam:data_1160	Identifier of an entry from the CPDB (ConsensusPathDB) biological pathways da...	Title: Pathway ID (CPDB)
edam:data_1161	edam:data_1161	Identifier of a biological pathway from the Panther Pathways database	Title: Pathway ID (Panther)
edam:data_1162	edam:data_1162	This is the identifier used internally by MIRIAM for a data type	Title: MIRIAM identifier
edam:data_1163	edam:data_1163	The name of a data type from the MIRIAM database	Title: MIRIAM data type name
edam:data_1164	edam:data_1164	A MIRIAM URI consists of the URI of the MIRIAM data type (PubMed, UniProt etc...	Title: MIRIAM URI
edam:data_1165	edam:data_1165	The primary name of a MIRIAM data type is taken from a controlled vocabulary	Title: MIRIAM data type primary name
edam:data_1166	edam:data_1166	A synonymous name for a MIRIAM data type taken from a controlled vocabulary	Title: MIRIAM data type synonymous name
edam:data_1167	edam:data_1167	Unique identifier of a Taverna workflow	Title: Taverna workflow ID
edam:data_1170	edam:data_1170	Name of a biological (mathematical) model	Title: Biological model name
edam:data_1171	edam:data_1171	Unique identifier of an entry from the BioModel database	Title: BioModel ID
edam:data_1172	edam:data_1172	Chemical structure specified in PubChem Compound Identification (CID), a non-...	Title: PubChem CID
edam:data_1173	edam:data_1173	Identifier of an entry from the ChemSpider database	Title: ChemSpider ID
edam:data_1174	edam:data_1174	Identifier of an entry from the ChEBI database	Title: ChEBI ID
edam:data_1175	edam:data_1175	An identifier of a concept from the BioPax ontology	Title: BioPax concept ID
edam:data_1176	edam:data_1176	An identifier of a concept from The Gene Ontology	Title: GO concept ID
edam:data_1177	edam:data_1177	An identifier of a concept from the MeSH vocabulary	Title: MeSH concept ID
edam:data_1178	edam:data_1178	An identifier of a concept from the HGNC controlled vocabulary	Title: HGNC concept ID
edam:data_1179	edam:data_1179	A stable unique identifier for each taxon (for a species, a family, an order,...	Title: NCBI taxonomy ID
edam:data_1180	edam:data_1180	An identifier of a concept from the Plant Ontology (PO)	Title: Plant Ontology concept ID
edam:data_1181	edam:data_1181	An identifier of a concept from the UMLS vocabulary	Title: UMLS concept ID
edam:data_1182	edam:data_1182	An identifier of a concept from Foundational Model of Anatomy	Title: FMA concept ID
edam:data_1183	edam:data_1183	An identifier of a concept from the EMAP mouse ontology	Title: EMAP concept ID
edam:data_1184	edam:data_1184	An identifier of a concept from the ChEBI ontology	Title: ChEBI concept ID
edam:data_1185	edam:data_1185	An identifier of a concept from the MGED ontology	Title: MGED concept ID
edam:data_1186	edam:data_1186	An identifier of a concept from the myGrid ontology	Title: myGrid concept ID
edam:data_1187	edam:data_1187	PubMed unique identifier of an article	Title: PubMed ID
edam:data_1188	edam:data_1188	Digital Object Identifier (DOI) of a published article	Title: DOI
edam:data_1189	edam:data_1189	Medline UI (unique identifier) of an article	Title: Medline UI
edam:data_1190	edam:data_1190	The name of a computer package, application, method or function	Title: Tool name
edam:data_1191	edam:data_1191	Signature methods from http://www	Title: Tool name (signature)
edam:data_1192	edam:data_1192	The name of a BLAST tool	Title: Tool name (BLAST)
edam:data_1193	edam:data_1193	The name of a FASTA tool	Title: Tool name (FASTA)
edam:data_1194	edam:data_1194	The name of an EMBOSS application	Title: Tool name (EMBOSS)
edam:data_1195	edam:data_1195	The name of an EMBASSY package	Title: Tool name (EMBASSY package)
edam:data_1201	edam:data_1201	A QSAR constitutional descriptor	Title: QSAR descriptor (constitutional)
edam:data_1202	edam:data_1202	A QSAR electronic descriptor	Title: QSAR descriptor (electronic)
edam:data_1203	edam:data_1203	A QSAR geometrical descriptor	Title: QSAR descriptor (geometrical)
edam:data_1204	edam:data_1204	A QSAR topological descriptor	Title: QSAR descriptor (topological)
edam:data_1205	edam:data_1205	A QSAR molecular descriptor	Title: QSAR descriptor (molecular)
edam:data_1233	edam:data_1233	Any collection of multiple protein sequences and associated metadata that do ...	Title: Sequence set (protein)
edam:data_1234	edam:data_1234	Any collection of multiple nucleotide sequences and associated metadata that ...	Title: Sequence set (nucleic acid)
edam:data_1235	edam:data_1235	A set of sequences that have been clustered or otherwise classified as belong...	Title: Sequence cluster
edam:data_1238	edam:data_1238	A protein sequence cleaved into peptide fragments (by enzymatic or chemical c...	Title: Proteolytic digest
edam:data_1239	edam:data_1239	Restriction digest fragments from digesting a nucleotide sequence with restri...	Title: Restriction digest
edam:data_1240	edam:data_1240	Oligonucleotide primer(s) for PCR and DNA amplification, for example a minima...	Title: PCR primers
edam:data_1245	edam:data_1245	A cluster of protein sequences	Title: Sequence cluster (protein)
edam:data_1246	edam:data_1246	A cluster of nucleotide sequences	Title: Sequence cluster (nucleic acid)
edam:data_1249	edam:data_1249	The size (length) of a sequence, subsequence or region in a sequence, or rang...	Title: Sequence length
edam:data_1254	edam:data_1254	An informative report about non-positional sequence features, typically a rep...	Title: Sequence property
edam:data_1255	edam:data_1255	Annotation of positional features of molecular sequence(s), i	Title: Sequence features
edam:data_1259	edam:data_1259	A report on sequence complexity, for example low-complexity or repeat regions...	Title: Sequence complexity report
edam:data_1260	edam:data_1260	A report on ambiguity in molecular sequence(s)	Title: Sequence ambiguity report
edam:data_1261	edam:data_1261	A report (typically a table) on character or word composition / frequency of ...	Title: Sequence composition report
edam:data_1262	edam:data_1262	A report on peptide fragments of certain molecular weight(s) in one or more p...	Title: Peptide molecular weight hits
edam:data_1263	edam:data_1263	A plot of third base position variability in a nucleotide sequence	Title: Base position variability plot
edam:data_1265	edam:data_1265	A table of base frequencies of a nucleotide sequence	Title: Base frequencies table
edam:data_1266	edam:data_1266	A table of word composition of a nucleotide sequence	Title: Base word frequencies table
edam:data_1267	edam:data_1267	A table of amino acid frequencies of a protein sequence	Title: Amino acid frequencies table
edam:data_1268	edam:data_1268	A table of amino acid word composition of a protein sequence	Title: Amino acid word frequencies table
edam:data_1270	edam:data_1270	Annotation of positional sequence features, organised into a standard feature...	Title: Feature table
edam:data_1274	edam:data_1274	A map of (typically one) DNA sequence annotated with positional or non-positi...	Title: Map
edam:data_1276	edam:data_1276	An informative report on intrinsic positional features of a nucleotide sequen...	Title: Nucleic acid features
edam:data_1277	edam:data_1277	An informative report on intrinsic positional features of a protein sequence	Title: Protein features
edam:data_1278	edam:data_1278	A genetic (linkage) map indicates the proximity of two genes on a chromosome,...	Title: Genetic map
edam:data_1279	edam:data_1279	A map of genetic markers in a contiguous, assembled genomic sequence, with th...	Title: Sequence map
edam:data_1280	edam:data_1280	A map of DNA (linear or circular) annotated with physical features or landmar...	Title: Physical map
edam:data_1283	edam:data_1283	A map showing banding patterns derived from direct observation of a stained c...	Title: Cytogenetic map
edam:data_1284	edam:data_1284	A gene map showing distances between loci based on relative cotransduction fr...	Title: DNA transduction map
edam:data_1285	edam:data_1285	Sequence map of a single gene annotated with genetic features such as introns...	Title: Gene map
edam:data_1286	edam:data_1286	Sequence map of a plasmid (circular DNA)	Title: Plasmid map
edam:data_1288	edam:data_1288	Sequence map of a whole genome	Title: Genome map
edam:data_1289	edam:data_1289	Image of the restriction enzyme cleavage sites (restriction sites) in a nucle...	Title: Restriction map
edam:data_1347	edam:data_1347	Dirichlet distribution used by hidden Markov model analysis programs	Title: Dirichlet distribution
edam:data_1352	edam:data_1352	Regular expression pattern	Title: Regular expression
edam:data_1353	edam:data_1353	Any specific or conserved pattern (typically expressed as a regular expressio...	Title: Sequence motif
edam:data_1354	edam:data_1354	Some type of statistical model representing a (typically multiple) sequence a...	Title: Sequence profile
edam:data_1355	edam:data_1355	An informative report about a specific or conserved protein sequence pattern	Title: Protein signature
edam:data_1361	edam:data_1361	A profile (typically representing a sequence alignment) that is a simple matr...	Title: Position frequency matrix
edam:data_1362	edam:data_1362	A profile (typically representing a sequence alignment) that is weighted matr...	Title: Position weight matrix
edam:data_1363	edam:data_1363	A profile (typically representing a sequence alignment) derived from a matrix...	Title: Information content matrix
edam:data_1364	edam:data_1364	A statistical Markov model of a system which is assumed to be a Markov proces...	Title: Hidden Markov model
edam:data_1365	edam:data_1365	One or more fingerprints (sequence classifiers) as used in the PRINTS databas...	Title: Fingerprint
edam:data_1381	edam:data_1381	Alignment of exactly two molecular sequences	Title: Pair sequence alignment
edam:data_1383	edam:data_1383	Alignment of multiple nucleotide sequences	Title: Nucleic acid sequence alignment
edam:data_1384	edam:data_1384	Alignment of multiple protein sequences	Title: Protein sequence alignment
edam:data_1385	edam:data_1385	Alignment of multiple molecular sequences of different types	Title: Hybrid sequence alignment
edam:data_1394	edam:data_1394	A simple floating point number defining the penalty for opening or extending ...	Title: Alignment score or penalty
edam:data_1397	edam:data_1397	A penalty for opening a gap in an alignment	Title: Gap opening penalty
edam:data_1398	edam:data_1398	A penalty for extending a gap in an alignment	Title: Gap extension penalty
edam:data_1399	edam:data_1399	A penalty for gaps that are close together in an alignment	Title: Gap separation penalty
edam:data_1401	edam:data_1401	The score for a 'match' used in various sequence database search applications...	Title: Match reward score
edam:data_1402	edam:data_1402	The score (penalty) for a 'mismatch' used in various alignment and sequence d...	Title: Mismatch penalty score
edam:data_1403	edam:data_1403	This is the threshold drop in score at which extension of word alignment is h...	Title: Drop off score
edam:data_1410	edam:data_1410	A number defining the penalty for opening gaps at the termini of an alignment...	Title: Terminal gap opening penalty
edam:data_1411	edam:data_1411	A number defining the penalty for extending gaps at the termini of an alignme...	Title: Terminal gap extension penalty
edam:data_1412	edam:data_1412	Sequence identity is the number (%) of matches (identical characters) in posi...	Title: Sequence identity
edam:data_1413	edam:data_1413	Data Type is float probably	Title: Sequence similarity
edam:data_1426	edam:data_1426	Continuous quantitative data that may be read during phylogenetic tree calcul...	Title: Phylogenetic continuous quantitative data
edam:data_1427	edam:data_1427	Character data with discrete states that may be read during phylogenetic tree...	Title: Phylogenetic discrete data
edam:data_1428	edam:data_1428	One or more cliques of mutually compatible characters that are generated, for...	Title: Phylogenetic character cliques
edam:data_1429	edam:data_1429	Phylogenetic invariants data for testing alternative tree topologies	Title: Phylogenetic invariants
edam:data_1439	edam:data_1439	A model of DNA substitution that explains a DNA sequence alignment, derived f...	Title: DNA substitution model
edam:data_1442	edam:data_1442	Distances, such as Branch Score distance, between two or more phylogenetic tr...	Title: Phylogenetic tree distances
edam:data_1444	edam:data_1444	Independent contrasts for characters used in a phylogenetic tree, or covarian...	Title: Phylogenetic character contrasts
edam:data_1448	edam:data_1448	Matrix of integer or floating point numbers for nucleotide comparison	Title: Comparison matrix (nucleotide)
edam:data_1449	edam:data_1449	Matrix of integer or floating point numbers for amino acid comparison	Title: Comparison matrix (amino acid)
edam:data_1459	edam:data_1459	3D coordinate and associated data for a nucleic acid tertiary (3D) structure	Title: Nucleic acid structure
edam:data_1460	edam:data_1460	3D coordinate and associated data for a protein tertiary (3D) structure, or p...	Title: Protein structure
edam:data_1461	edam:data_1461	The structure of a protein in complex with a ligand, typically a small molecu...	Title: Protein-ligand complex
edam:data_1462	edam:data_1462	3D coordinate and associated data for a carbohydrate (3D) structure	Title: Carbohydrate structure
edam:data_1463	edam:data_1463	3D coordinate and associated data for the (3D) structure of a small molecule,...	Title: Small molecule structure
edam:data_1464	edam:data_1464	3D coordinate and associated data for a DNA tertiary (3D) structure	Title: DNA structure
edam:data_1465	edam:data_1465	3D coordinate and associated data for an RNA tertiary (3D) structure	Title: RNA structure
edam:data_1466	edam:data_1466	3D coordinate and associated data for a tRNA tertiary (3D) structure, includi...	Title: tRNA structure
edam:data_1467	edam:data_1467	3D coordinate and associated data for the tertiary (3D) structure of a polype...	Title: Protein chain
edam:data_1468	edam:data_1468	3D coordinate and associated data for the tertiary (3D) structure of a protei...	Title: Protein domain
edam:data_1470	edam:data_1470	3D coordinate and associated data for a protein tertiary (3D) structure (typi...	Title: C-alpha trace
edam:data_1479	edam:data_1479	Alignment (superimposition) of exactly two molecular tertiary (3D) structures	Title: Structure alignment (pair)
edam:data_1481	edam:data_1481	Alignment (superimposition) of protein tertiary (3D) structures	Title: Protein structure alignment
edam:data_1482	edam:data_1482	Alignment (superimposition) of nucleic acid tertiary (3D) structures	Title: Nucleic acid structure alignment
edam:data_1493	edam:data_1493	Alignment (superimposition) of RNA tertiary (3D) structures	Title: RNA structure alignment
edam:data_1494	edam:data_1494	Matrix to transform (rotate/translate) 3D coordinates, typically the transfor...	Title: Structural transformation matrix
edam:data_1497	edam:data_1497	Root-mean-square deviation (RMSD) is calculated to measure the average distan...	Title: Root-mean-square deviation
edam:data_1498	edam:data_1498	A ligand fingerprint is derived from ligand structural data from a Protein Da...	Title: Tanimoto similarity score
edam:data_1499	edam:data_1499	A matrix of 3D-1D scores reflecting the probability of amino acids to occur i...	Title: 3D-1D scoring matrix
edam:data_1501	edam:data_1501	A table of 20 numerical values which quantify a property (e	Title: Amino acid index
edam:data_1502	edam:data_1502	Chemical classification (small, aliphatic, aromatic, polar, charged etc) of a...	Title: Amino acid index (chemical classes)
edam:data_1503	edam:data_1503	Statistical protein contact potentials	Title: Amino acid pair-wise contact potentials
edam:data_1505	edam:data_1505	Molecular weights of amino acids	Title: Amino acid index (molecular weight)
edam:data_1506	edam:data_1506	Hydrophobic, hydrophilic or charge properties of amino acids	Title: Amino acid index (hydropathy)
edam:data_1507	edam:data_1507	Experimental free energy values for the water-interface and water-octanol tra...	Title: Amino acid index (White-Wimley data)
edam:data_1508	edam:data_1508	Van der Waals radii of atoms for different amino acid residues	Title: Amino acid index (van der Waals radii)
edam:data_1519	edam:data_1519	List of molecular weight(s) of one or more proteins or peptides, for example ...	Title: Peptide molecular weights
edam:data_1520	edam:data_1520	Hydrophobic moment is a peptides hydrophobicity measured for different angles...	Title: Peptide hydrophobic moment
edam:data_1521	edam:data_1521	The aliphatic index is the relative protein volume occupied by aliphatic side...	Title: Protein aliphatic index
edam:data_1522	edam:data_1522	A protein sequence with annotation on hydrophobic or hydrophilic / charged re...	Title: Protein sequence hydropathy plot
edam:data_1523	edam:data_1523	A plot of the mean charge of the amino acids within a window of specified len...	Title: Protein charge plot
edam:data_1524	edam:data_1524	The solubility or atomic solvation energy of a protein sequence or structure	Title: Protein solubility
edam:data_1525	edam:data_1525	Data on the crystallizability of a protein sequence	Title: Protein crystallizability
edam:data_1526	edam:data_1526	Data on the stability, intrinsic disorder or globularity of a protein sequenc...	Title: Protein globularity
edam:data_1527	edam:data_1527	The titration curve of a protein	Title: Protein titration curve
edam:data_1528	edam:data_1528	The isoelectric point of one proteins	Title: Protein isoelectric point
edam:data_1529	edam:data_1529	The pKa value of a protein	Title: Protein pKa value
edam:data_1530	edam:data_1530	The hydrogen exchange rate of a protein	Title: Protein hydrogen exchange rate
edam:data_1531	edam:data_1531	The extinction coefficient of a protein	Title: Protein extinction coefficient
edam:data_1532	edam:data_1532	The optical density of a protein	Title: Protein optical density
edam:data_1534	edam:data_1534	An report on allergenicity / immunogenicity of peptides and proteins	Title: Peptide immunogenicity data
edam:data_1537	edam:data_1537	A human-readable collection of information about one or more specific protein...	Title: Protein structure report
edam:data_1539	edam:data_1539	Model validation might involve checks for atomic packing, steric clashes, agr...	Title: Protein structural quality report
edam:data_1542	edam:data_1542	Data on the solvent accessible or buried surface area of a protein structure	Title: Protein solvent accessibility
edam:data_1544	edam:data_1544	Phi/psi angle data or a Ramachandran plot of a protein structure	Title: Ramachandran plot
edam:data_1545	edam:data_1545	Data on the net charge distribution (dipole moment) of a protein structure	Title: Protein dipole moment
edam:data_1546	edam:data_1546	A matrix of distances between amino acid residues (for example the C-alpha at...	Title: Protein distance matrix
edam:data_1547	edam:data_1547	An amino acid residue contact map for a protein structure	Title: Protein contact map
edam:data_1548	edam:data_1548	Report on clusters of contacting residues in protein structures such as a key...	Title: Protein residue 3D cluster
edam:data_1549	edam:data_1549	Patterns of hydrogen bonding in protein structures	Title: Protein hydrogen bonds
edam:data_1566	edam:data_1566	An informative report on protein-ligand (small molecule) interaction(s)	Title: Protein-ligand interaction report
edam:data_1583	edam:data_1583	A melting (stability) profile calculated the free energy required to unwind a...	Title: Nucleic acid melting profile
edam:data_1584	edam:data_1584	Enthalpy of hybridised or double stranded nucleic acid (DNA or RNA/DNA)	Title: Nucleic acid enthalpy
edam:data_1585	edam:data_1585	Entropy of hybridised or double stranded nucleic acid (DNA or RNA/DNA)	Title: Nucleic acid entropy
edam:data_1588	edam:data_1588	DNA base pair stacking energies data	Title: DNA base pair stacking energies data
edam:data_1589	edam:data_1589	DNA base pair twist angle data	Title: DNA base pair twist angle data
edam:data_1590	edam:data_1590	DNA base trimer roll angles data	Title: DNA base trimer roll angles data
edam:data_1595	edam:data_1595	Dotplot of RNA base pairing probability matrix	Title: Base pairing probability matrix dotplot
edam:data_1596	edam:data_1596	A human-readable collection of information about RNA/DNA folding, minimum fol...	Title: Nucleic acid folding report
edam:data_1597	edam:data_1597	A codon usage table might include the codon usage table name, optional commen...	Title: Codon usage table
edam:data_1598	edam:data_1598	A genetic code for an organism	Title: Genetic code
edam:data_1600	edam:data_1600	A plot of the synonymous codon usage calculated for windows over a nucleotide...	Title: Codon usage bias plot
edam:data_1602	edam:data_1602	The differences in codon usage fractions between two codon usage tables	Title: Codon usage fraction difference
edam:data_1621	edam:data_1621	A human-readable collection of information about the influence of genotype on...	Title: Pharmacogenomic test report
edam:data_1622	edam:data_1622	A human-readable collection of information about a specific disease	Title: Disease report
edam:data_1636	edam:data_1636	A graphical 2D tabular representation of expression data, typically derived f...	Title: Heat map
edam:data_1667	edam:data_1667	A simple floating point number defining the lower or upper limit of an expect...	Title: E-value
edam:data_1668	edam:data_1668	A z-value might be specified as a threshold for reporting hits from database ...	Title: Z-value
edam:data_1669	edam:data_1669	A z-value might be specified as a threshold for reporting hits from database ...	Title: P-value
edam:data_1689	edam:data_1689	A username on a computer system or a website	Title: Username
edam:data_1690	edam:data_1690	A password on a computer system, or a website	Title: Password
edam:data_1691	edam:data_1691	A valid email address of an end-user	Title: Email address
edam:data_1692	edam:data_1692	The name of a person	Title: Person name
edam:data_1696	edam:data_1696	A drug structure relationship map is report (typically a map diagram) of drug...	Title: Drug report
edam:data_1707	edam:data_1707	An image (for viewing or printing) of a phylogenetic tree including (typicall...	Title: Phylogenetic tree image
edam:data_1708	edam:data_1708	Image of RNA secondary structure, knots, pseudoknots etc	Title: RNA secondary structure image
edam:data_1709	edam:data_1709	Image of protein secondary structure	Title: Protein secondary structure image
edam:data_1710	edam:data_1710	Image of one or more molecular tertiary (3D) structures	Title: Structure image
edam:data_1711	edam:data_1711	Image of two or more aligned molecular sequences possibly annotated with alig...	Title: Sequence alignment image
edam:data_1712	edam:data_1712	An image of the structure of a small chemical compound	Title: Chemical structure image
edam:data_1713	edam:data_1713	A fate map is a plan of early stage of an embryo such as a blastula, showing ...	Title: Fate map
edam:data_1714	edam:data_1714	An image of spots from a microarray experiment	Title: Microarray spots image
edam:data_1731	edam:data_1731	The definition of a concept from an ontology	Title: Ontology concept definition
edam:data_1742	edam:data_1742	A residue identifier (a string) from a PDB file	Title: PDB residue number
edam:data_1743	edam:data_1743	Cartesian coordinate of an atom (in a molecular structure)	Title: Atomic coordinate
edam:data_1748	edam:data_1748	Identifier (a string) of a specific atom from a PDB file for a molecular stru...	Title: PDB atom name
edam:data_1755	edam:data_1755	Data on a single atom from a protein structure	Title: Protein atom
edam:data_1756	edam:data_1756	Data on a single amino acid residue position in a protein structure	Title: Protein residue
edam:data_1757	edam:data_1757	Name of an atom	Title: Atom name
edam:data_1758	edam:data_1758	Three-letter amino acid residue names as used in PDB files	Title: PDB residue name
edam:data_1759	edam:data_1759	Identifier of a model structure from a PDB file	Title: PDB model number
edam:data_1771	edam:data_1771	Information on an molecular sequence version	Title: Sequence version
edam:data_1772	edam:data_1772	A numerical value, that is some type of scored value arising for example from...	Title: Score
edam:data_1794	edam:data_1794	Identifier of a gene from PlasmoDB Plasmodium Genome Resource	Title: Gene ID (PlasmoDB)
edam:data_1795	edam:data_1795	Identifier of a gene from EcoGene Database	Title: Gene ID (EcoGene)
edam:data_1796	edam:data_1796	Gene identifier from FlyBase database	Title: Gene ID (FlyBase)
edam:data_1802	edam:data_1802	Gene identifier from Gramene database	Title: Gene ID (Gramene)
edam:data_1803	edam:data_1803	Gene identifier from Virginia Bioinformatics Institute microbial database	Title: Gene ID (Virginia microbial)
edam:data_1804	edam:data_1804	Gene identifier from Sol Genomics Network	Title: Gene ID (SGN)
edam:data_1805	edam:data_1805	Gene identifier used by WormBase database	Title: Gene ID (WormBase)
edam:data_1807	edam:data_1807	The name of an open reading frame attributed by a sequencing project	Title: ORF name
edam:data_1855	edam:data_1855	An identifier of a clone (cloned molecular sequence) from a database	Title: Clone ID
edam:data_1856	edam:data_1856	An insertion code (part of the residue number) for an amino acid residue from...	Title: PDB insertion code
edam:data_1857	edam:data_1857	The fraction of an atom type present at a site in a molecular structure	Title: Atomic occupancy
edam:data_1858	edam:data_1858	Isotropic B factor (atomic displacement parameter) for an atom from a PDB fil...	Title: Isotropic B factor
edam:data_1859	edam:data_1859	A cytogenetic map is built from a set of mutant cell lines with sub-chromosom...	Title: Deletion map
edam:data_1860	edam:data_1860	A genetic map which shows the approximate location of quantitative trait loci...	Title: QTL map
edam:data_1863	edam:data_1863	A map of haplotypes in a genome or other sequence, describing common patterns...	Title: Haplotype map
edam:data_1867	edam:data_1867	The name of a protein fold	Title: Protein fold name
edam:data_1868	edam:data_1868	For a complete list of taxonomic ranks see https://www	Title: Taxon
edam:data_1869	edam:data_1869	A unique identifier of a (group of) organisms	Title: Organism identifier
edam:data_1870	edam:data_1870	The name of a genus of organism	Title: Genus name
edam:data_1872	edam:data_1872	Name components correspond to levels in a taxonomic hierarchy (e	Title: Taxonomic classification
edam:data_1873	edam:data_1873	A unique identifier for an organism used in the iHOP database	Title: iHOP organism ID
edam:data_1874	edam:data_1874	Common name for an organism as used in the GenBank database	Title: Genbank common name
edam:data_1875	edam:data_1875	The name of a taxon from the NCBI taxonomy database	Title: NCBI taxon
edam:data_1881	edam:data_1881	Information on the authors of a published work	Title: Author ID
edam:data_1882	edam:data_1882	An identifier representing an author in the DragonDB database	Title: DragonDB author identifier
edam:data_1883	edam:data_1883	A URI along with annotation describing the data found at the address	Title: Annotated URI
edam:data_1885	edam:data_1885	Identifier of a gene from the GeneFarm database	Title: Gene ID (GeneFarm)
edam:data_1886	edam:data_1886	The blattner identifier for a gene	Title: Blattner number
edam:data_1891	edam:data_1891	A unique identifier of a protein or gene used in the iHOP database	Title: iHOP symbol
edam:data_1893	edam:data_1893	A unique name or other identifier of a genetic locus, typically conforming to...	Title: Locus ID
edam:data_1895	edam:data_1895	Locus identifier for Arabidopsis Genome Initiative (TAIR, TIGR and MIPS datab...	Title: Locus ID (AGI)
edam:data_1896	edam:data_1896	Identifier for loci from ASPGD (Aspergillus Genome Database)	Title: Locus ID (ASPGD)
edam:data_1897	edam:data_1897	Identifier for loci from Magnaporthe grisea Database at the Broad Institute	Title: Locus ID (MGG)
edam:data_1898	edam:data_1898	Identifier for loci from CGD (Candida Genome Database)	Title: Locus ID (CGD)
edam:data_1899	edam:data_1899	Locus identifier for Comprehensive Microbial Resource at the J	Title: Locus ID (CMR)
edam:data_1900	edam:data_1900	Identifier for loci from NCBI database	Title: NCBI locus tag
edam:data_1901	edam:data_1901	Identifier for loci from SGD (Saccharomyces Genome Database)	Title: Locus ID (SGD)
edam:data_1902	edam:data_1902	Identifier of loci from Maize Mapping Project	Title: Locus ID (MMP)
edam:data_1903	edam:data_1903	Identifier of locus from DictyBase (Dictyostelium discoideum)	Title: Locus ID (DictyBase)
edam:data_1904	edam:data_1904	Identifier of a locus from EntrezGene database	Title: Locus ID (EntrezGene)
edam:data_1905	edam:data_1905	Identifier of locus from MaizeGDB (Maize genome database)	Title: Locus ID (MaizeGDB)
edam:data_1907	edam:data_1907	Identifier of a gene from the KOME database	Title: Gene ID (KOME)
edam:data_1908	edam:data_1908	Identifier of a locus from the Tropgene database	Title: Locus ID (Tropgene)
edam:data_1916	edam:data_1916	An alignment of molecular sequences, structures or profiles derived from them	Title: Alignment
edam:data_1917	edam:data_1917	Data for an atom (in a molecular structure)	Title: Atomic property
edam:data_2007	edam:data_2007	A word or phrase that can appear in the keywords field (KW line) of entries f...	Title: UniProt keyword
edam:data_2012	edam:data_2012	A position in a map (for example a genetic map), either a single position (po...	Title: Sequence coordinates
edam:data_2016	edam:data_2016	Data concerning the intrinsic physical (e	Title: Amino acid property
edam:data_2019	edam:data_2019	Data describing a molecular map (genetic or physical) or a set of such maps, ...	Title: Map data
edam:data_2024	edam:data_2024	Data concerning chemical reaction(s) catalysed by enzyme(s)	Title: Enzyme kinetics data
edam:data_2025	edam:data_2025	A plot giving an approximation of the kinetics of an enzyme-catalysed reactio...	Title: Michaelis Menten plot
edam:data_2026	edam:data_2026	A plot based on the Michaelis Menten equation of enzyme kinetics plotting the...	Title: Hanes Woolf plot
edam:data_2042	edam:data_2042	Typically a human-readable summary of body of facts or information indicating...	Title: Evidence
edam:data_2044	edam:data_2044	One or more molecular sequences, possibly with associated annotation	Title: Sequence
edam:data_2048	edam:data_2048	A human-readable collection of information including annotation on a biologic...	Title: Report
edam:data_2050	edam:data_2050	General data for a molecule	Title: Molecular property (general)
edam:data_2070	edam:data_2070	A nucleotide sequence motif	Title: Sequence motif (nucleic acid)
edam:data_2071	edam:data_2071	An amino acid sequence motif	Title: Sequence motif (protein)
edam:data_2080	edam:data_2080	A report of hits from searching a database of some type	Title: Database search results
edam:data_2082	edam:data_2082	An array of numerical values	Title: Matrix
edam:data_2084	edam:data_2084	A human-readable collection of information about one or more specific nucleic...	Title: Nucleic acid report
edam:data_2085	edam:data_2085	A human-readable collection of information about one or more molecular tertia...	Title: Structure report
edam:data_2087	edam:data_2087	A report on the physical (e	Title: Molecular property
edam:data_2088	edam:data_2088	Structural data for DNA base pairs or runs of bases, such as energy or angle ...	Title: DNA base structural data
edam:data_2091	edam:data_2091	A persistent (stable) and unique identifier, typically identifying an object ...	Title: Accession
edam:data_2093	edam:data_2093	A list of database accessions or identifiers are usually included	Title: Data reference
edam:data_2098	edam:data_2098	An identifier of a submitted job	Title: Job identifier
edam:data_2099	edam:data_2099	A name of a thing, which need not necessarily uniquely identify it	Title: Name
edam:data_2101	edam:data_2101	Authentication data usually used to log in into an account on an information ...	Title: Account authentication
edam:data_2102	edam:data_2102	A three-letter code used in the KEGG databases to uniquely identify organisms	Title: KEGG organism code
edam:data_2104	edam:data_2104	Identifier of an object from one of the BioCyc databases	Title: BioCyc ID
edam:data_2105	edam:data_2105	Identifier of a compound from the BioCyc chemical compounds database	Title: Compound ID (BioCyc)
edam:data_2106	edam:data_2106	Identifier of a biological reaction from the BioCyc reactions database	Title: Reaction ID (BioCyc)
edam:data_2107	edam:data_2107	Identifier of an enzyme from the BioCyc enzymes database	Title: Enzyme ID (BioCyc)
edam:data_2108	edam:data_2108	Identifier of a biological reaction from a database	Title: Reaction ID
edam:data_2109	edam:data_2109	An identifier that is re-used for data objects of fundamentally different typ...	Title: Identifier (hybrid)
edam:data_2110	edam:data_2110	Identifier of a molecular property	Title: Molecular property identifier
edam:data_2111	edam:data_2111	Identifier of a codon usage table, for example a genetic code	Title: Codon usage table ID
edam:data_2112	edam:data_2112	Primary identifier of an object from the FlyBase database	Title: FlyBase primary identifier
edam:data_2113	edam:data_2113	Identifier of an object from the WormBase database	Title: WormBase identifier
edam:data_2114	edam:data_2114	Protein identifier used by WormBase database	Title: WormBase wormpep ID
edam:data_2117	edam:data_2117	An identifier of a map of a molecular sequence	Title: Map identifier
edam:data_2118	edam:data_2118	An identifier of a software end-user on a website or a database (typically a ...	Title: Person identifier
edam:data_2119	edam:data_2119	Name or other identifier of a nucleic acid molecule	Title: Nucleic acid identifier
edam:data_2127	edam:data_2127	An identifier of a genetic code	Title: Genetic code identifier
edam:data_2128	edam:data_2128	Informal name for a genetic code, typically an organism name	Title: Genetic code name
edam:data_2129	edam:data_2129	Name of a file format such as HTML, PNG, PDF, EMBL, GenBank and so on	Title: File format name
edam:data_2131	edam:data_2131	Name of a computer operating system such as Linux, PC or Mac	Title: Operating system name
edam:data_2133	edam:data_2133	A logical operator such as OR, AND, XOR, and NOT	Title: Logical operator
edam:data_2137	edam:data_2137	A penalty for introducing or extending a gap in an alignment	Title: Gap penalty
edam:data_2139	edam:data_2139	A temperature concerning nucleic acid denaturation, typically the temperature...	Title: Nucleic acid melting temperature
edam:data_2140	edam:data_2140	The concentration of a chemical compound	Title: Concentration
edam:data_2154	edam:data_2154	Any arbitrary name of a molecular sequence	Title: Sequence name
edam:data_2160	edam:data_2160	A plot of Fickett testcode statistic (identifying protein coding regions) in ...	Title: Fickett testcode plot
edam:data_2161	edam:data_2161	A plot of sequence similarities identified from word-matching or character co...	Title: Sequence similarity plot
edam:data_2162	edam:data_2162	An image of peptide sequence sequence looking down the axis of the helix for ...	Title: Helical wheel
edam:data_2163	edam:data_2163	An image of peptide sequence sequence in a simple 3,4,3,4 repeating pattern t...	Title: Helical net
edam:data_2165	edam:data_2165	A plot of pK versus pH for a protein	Title: Protein ionisation curve
edam:data_2166	edam:data_2166	A plot of character or word composition / frequency of a molecular sequence	Title: Sequence composition plot
edam:data_2167	edam:data_2167	Density plot (of base composition) for a nucleotide sequence	Title: Nucleic acid density plot
edam:data_2168	edam:data_2168	Image of a sequence trace (nucleotide sequence versus probabilities of each o...	Title: Sequence trace image
edam:data_2174	edam:data_2174	Secondary identifier are used to handle entries that were merged with or spli...	Title: FlyBase secondary identifier
edam:data_2190	edam:data_2190	A fixed-size datum calculated (by using a hash function) for a molecular sequ...	Title: Sequence checksum
edam:data_2193	edam:data_2193	Basic information on any arbitrary database entry	Title: Database entry metadata
edam:data_2208	edam:data_2208	An identifier of a plasmid in a database	Title: Plasmid identifier
edam:data_2209	edam:data_2209	A unique identifier of a specific mutation catalogued in a database	Title: Mutation ID
edam:data_2216	edam:data_2216	The number of a codon, for instance, at which a mutation is located	Title: Codon number
edam:data_2219	edam:data_2219	The name of a field in a database	Title: Database field name
edam:data_2220	edam:data_2220	Unique identifier of a sequence cluster from the SYSTERS database	Title: Sequence cluster ID (SYSTERS)
edam:data_2223	edam:data_2223	Data concerning a biological ontology	Title: Ontology metadata
edam:data_2253	edam:data_2253	The name of a data type	Title: Data resource definition name
edam:data_2254	edam:data_2254	Name of an OBO file format such as OBO-XML, plain and so on	Title: OBO file format name
edam:data_2285	edam:data_2285	Identifier for genetic elements in MIPS database	Title: Gene ID (MIPS)
edam:data_2290	edam:data_2290	An accession number of an entry from the EMBL sequence database	Title: EMBL accession
edam:data_2291	edam:data_2291	An identifier of a polypeptide in the UniProt database	Title: UniProt ID
edam:data_2292	edam:data_2292	Accession number of an entry from the GenBank sequence database	Title: GenBank accession
edam:data_2293	edam:data_2293	Secondary (internal) identifier of a Gramene database entry	Title: Gramene secondary identifier
edam:data_2294	edam:data_2294	An identifier of an entry from a database of molecular sequence variation	Title: Sequence variation ID
edam:data_2295	edam:data_2295	A unique (and typically persistent) identifier of a gene in a database, that ...	Title: Gene ID
edam:data_2297	edam:data_2297	Identifier of an E	Title: Gene ID (ECK)
edam:data_2298	edam:data_2298	Identifier for a gene approved by the HUGO Gene Nomenclature Committee	Title: Gene ID (HGNC)
edam:data_2299	edam:data_2299	The name of a gene, (typically) assigned by a person and/or according to a na...	Title: Gene name
edam:data_2301	edam:data_2301	A specification of a chemical structure in SMILES format	Title: SMILES string
edam:data_2302	edam:data_2302	Unique identifier of an entry from the STRING database of protein-protein int...	Title: STRING ID
edam:data_2309	edam:data_2309	Identifier of a biological reaction from the SABIO-RK reactions database	Title: Reaction ID (SABIO-RK)
edam:data_2313	edam:data_2313	A human-readable collection of information about one or more specific carbohy...	Title: Carbohydrate report
edam:data_2314	edam:data_2314	A series of digits that are assigned consecutively to each sequence record pr...	Title: GI number
edam:data_2315	edam:data_2315	An identifier assigned to sequence records processed by NCBI, made of the acc...	Title: NCBI version
edam:data_2316	edam:data_2316	The name of a cell line	Title: Cell line name
edam:data_2317	edam:data_2317	The exact name of a cell line	Title: Cell line name (exact)
edam:data_2318	edam:data_2318	The truncated name of a cell line	Title: Cell line name (truncated)
edam:data_2319	edam:data_2319	The name of a cell line without any punctuation	Title: Cell line name (no punctuation)
edam:data_2320	edam:data_2320	The assonant name of a cell line	Title: Cell line name (assonant)
edam:data_2321	edam:data_2321	A unique, persistent identifier of an enzyme	Title: Enzyme ID
edam:data_2325	edam:data_2325	Identifier of an enzyme from the REBASE enzymes database	Title: REBASE enzyme number
edam:data_2326	edam:data_2326	Unique identifier of a drug from the DrugBank database	Title: DrugBank ID
edam:data_2327	edam:data_2327	A unique identifier assigned to NCBI protein sequence records	Title: GI number (protein)
edam:data_2335	edam:data_2335	A score derived from the alignment of two sequences, which is then normalised...	Title: Bit score
edam:data_2337	edam:data_2337	Data concerning or describing some core computational resource, as distinct f...	Title: Resource metadata
edam:data_2338	edam:data_2338	Any arbitrary identifier of an ontology	Title: Ontology identifier
edam:data_2339	edam:data_2339	The name of a concept in an ontology	Title: Ontology concept name
edam:data_2340	edam:data_2340	An identifier of a build of a particular genome	Title: Genome build identifier
edam:data_2342	edam:data_2342	The name of a biological pathway or network	Title: Pathway or network name
edam:data_2343	edam:data_2343	Identifier of a pathway from the KEGG pathway database	Title: Pathway ID (KEGG)
edam:data_2344	edam:data_2344	Identifier of a pathway from the NCI-Nature pathway database	Title: Pathway ID (NCI-Nature)
edam:data_2345	edam:data_2345	Identifier of a pathway from the ConsensusPathDB pathway database	Title: Pathway ID (ConsensusPathDB)
edam:data_2346	edam:data_2346	Unique identifier of an entry from the UniRef database	Title: Sequence cluster ID (UniRef)
edam:data_2347	edam:data_2347	Unique identifier of an entry from the UniRef100 database	Title: Sequence cluster ID (UniRef100)
edam:data_2348	edam:data_2348	Unique identifier of an entry from the UniRef90 database	Title: Sequence cluster ID (UniRef90)
edam:data_2349	edam:data_2349	Unique identifier of an entry from the UniRef50 database	Title: Sequence cluster ID (UniRef50)
edam:data_2353	edam:data_2353	Data concerning or derived from an ontology	Title: Ontology data
edam:data_2354	edam:data_2354	A human-readable collection of information about a specific RNA family or oth...	Title: RNA family report
edam:data_2355	edam:data_2355	Identifier of an RNA family, typically an entry from a RNA sequence classific...	Title: RNA family identifier
edam:data_2356	edam:data_2356	Stable accession number of an entry (RNA family) from the RFAM database	Title: RFAM accession
edam:data_2362	edam:data_2362	Accession number of a nucleotide or protein sequence database entry	Title: Sequence accession (hybrid)
edam:data_2365	edam:data_2365	A persistent, unique identifier of a biological pathway or network (typically...	Title: Pathway or network accession
edam:data_2366	edam:data_2366	Alignment of the (1D representations of) secondary structure of two or more m...	Title: Secondary structure alignment
edam:data_2367	edam:data_2367	Identifier of an object from the ASTD database	Title: ASTD ID
edam:data_2368	edam:data_2368	Identifier of an exon from the ASTD database	Title: ASTD ID (exon)
edam:data_2369	edam:data_2369	Identifier of an intron from the ASTD database	Title: ASTD ID (intron)
edam:data_2370	edam:data_2370	Identifier of a polyA signal from the ASTD database	Title: ASTD ID (polya)
edam:data_2371	edam:data_2371	Identifier of a transcription start site from the ASTD database	Title: ASTD ID (tss)
edam:data_2373	edam:data_2373	Unique identifier of a spot from a two-dimensional (protein) gel	Title: Spot ID
edam:data_2374	edam:data_2374	Unique identifier of a spot from a two-dimensional (protein) gel in the SWISS...	Title: Spot serial number
edam:data_2375	edam:data_2375	Unique identifier of a spot from a two-dimensional (protein) gel from a HSC-2...	Title: Spot ID (HSC-2DPAGE)
edam:data_2379	edam:data_2379	Identifier of a strain of an organism variant, typically a plant, virus or ba...	Title: Strain identifier
edam:data_2380	edam:data_2380	A unique identifier of an item from the CABRI database	Title: CABRI accession
edam:data_2382	edam:data_2382	Identifier of an entry from a database of genotype experiment metadata	Title: Genotype experiment ID
edam:data_2383	edam:data_2383	Identifier of an entry from the EGA database	Title: EGA accession
edam:data_2384	edam:data_2384	Identifier of a protein entry catalogued in the International Protein Index (...	Title: IPI protein ID
edam:data_2385	edam:data_2385	Accession number of a protein from the RefSeq database	Title: RefSeq accession (protein)
edam:data_2386	edam:data_2386	Identifier of an entry (promoter) from the EPD database	Title: EPD ID
edam:data_2387	edam:data_2387	Identifier of an entry from the TAIR database	Title: TAIR accession
edam:data_2388	edam:data_2388	Identifier of an Arabidopsis thaliana gene from the TAIR database	Title: TAIR accession (At gene)
edam:data_2389	edam:data_2389	Identifier of an entry from the UniSTS database	Title: UniSTS accession
edam:data_2390	edam:data_2390	Identifier of an entry from the UNITE database	Title: UNITE accession
edam:data_2391	edam:data_2391	Identifier of an entry from the UTR database	Title: UTR accession
edam:data_2392	edam:data_2392	Accession number of a UniParc (protein sequence) database entry	Title: UniParc accession
edam:data_2393	edam:data_2393	Identifier of an entry from the Rouge or HUGE databases	Title: mFLJ/mKIAA number
edam:data_2398	edam:data_2398	Unique identifier for a protein from the Ensembl database	Title: Ensembl protein ID
edam:data_2523	edam:data_2523	Data concerning phylogeny, typically of molecular sequences, including report...	Title: Phylogenetic data
edam:data_2526	edam:data_2526	Data concerning, extracted from, or derived from the analysis of a scientific...	Title: Text data
edam:data_2530	edam:data_2530	A human-readable collection of information about a specific organism	Title: Organism report
edam:data_2531	edam:data_2531	A human-readable collection of information about about how a scientific exper...	Title: Protocol
edam:data_2534	edam:data_2534	An attribute of a molecular sequence, possibly in reference to some other seq...	Title: Sequence attribute
edam:data_2535	edam:data_2535	Output from a serial analysis of gene expression (SAGE), massively parallel s...	Title: Sequence tag profile
edam:data_2536	edam:data_2536	Data concerning a mass spectrometry measurement	Title: Mass spectrometry data
edam:data_2537	edam:data_2537	Raw data from experimental methods for determining protein structure	Title: Protein structure raw data
edam:data_2538	edam:data_2538	An identifier of a mutation	Title: Mutation identifier
edam:data_2563	edam:data_2563	Single letter amino acid identifier, e	Title: Amino acid name (single letter)
edam:data_2564	edam:data_2564	Three letter amino acid identifier, e	Title: Amino acid name (three letter)
edam:data_2565	edam:data_2565	Full name of an amino acid, e	Title: Amino acid name (full name)
edam:data_2576	edam:data_2576	Identifier of a toxin	Title: Toxin identifier
edam:data_2578	edam:data_2578	Unique identifier of a toxin from the ArachnoServer database	Title: ArachnoServer ID
edam:data_2580	edam:data_2580	Unique identifier of a monomer from the BindingDB database	Title: BindingDB Monomer ID
edam:data_2582	edam:data_2582	An identifier of a 'biological process' concept from the the Gene Ontology	Title: GO concept ID (biological process)
edam:data_2583	edam:data_2583	An identifier of a 'molecular function' concept from the the Gene Ontology	Title: GO concept ID (molecular function)
edam:data_2586	edam:data_2586	An image arising from a Northern Blot experiment	Title: Northern blot image
edam:data_2587	edam:data_2587	Unique identifier of a blot from a Northern Blot	Title: Blot ID
edam:data_2588	edam:data_2588	Unique identifier of a blot from a Northern Blot from the BlotBase database	Title: BlotBase blot ID
edam:data_2589	edam:data_2589	Raw data on a biological hierarchy, describing the hierarchy proper, hierarch...	Title: Hierarchy
edam:data_2591	edam:data_2591	Identifier of an entry from the Brite database of biological hierarchies	Title: Brite hierarchy ID
edam:data_2593	edam:data_2593	A unique identifier for an organism used in the BRENDA database	Title: BRENDA organism ID
edam:data_2594	edam:data_2594	The name of a taxon using the controlled vocabulary of the UniGene database	Title: UniGene taxon
edam:data_2595	edam:data_2595	The name of a taxon using the controlled vocabulary of the UTRdb database	Title: UTRdb taxon
edam:data_2596	edam:data_2596	An identifier of a catalogue of biological resources	Title: Catalogue ID
edam:data_2597	edam:data_2597	The name of a catalogue of biological resources from the CABRI database	Title: CABRI catalogue name
edam:data_2600	edam:data_2600	Primary data about a specific biological pathway or network (the nodes and co...	Title: Pathway or network
edam:data_2603	edam:data_2603	Image, hybridisation or some other data arising from a study of feature/molec...	Title: Expression data
edam:data_2605	edam:data_2605	Unique identifier of a chemical compound from the KEGG database	Title: Compound ID (KEGG)
edam:data_2606	edam:data_2606	Name (not necessarily stable) an entry (RNA family) from the RFAM database	Title: RFAM name
edam:data_2608	edam:data_2608	Identifier of a biological reaction from the KEGG reactions database	Title: Reaction ID (KEGG)
edam:data_2609	edam:data_2609	Unique identifier of a drug from the KEGG Drug database	Title: Drug ID (KEGG)
edam:data_2610	edam:data_2610	Identifier of an entry (exon, gene, transcript or protein) from the Ensembl d...	Title: Ensembl ID
edam:data_2611	edam:data_2611	An identifier of a disease from the International Classification of Diseases ...	Title: ICD identifier
edam:data_2612	edam:data_2612	Unique identifier of a sequence cluster from the CluSTr database	Title: Sequence cluster ID (CluSTr)
edam:data_2613	edam:data_2613	Unique identifier of a glycan ligand from the KEGG GLYCAN database (a subset ...	Title: KEGG Glycan ID
edam:data_2614	edam:data_2614	A unique identifier of a family from the transport classification database (T...	Title: TCDB ID
edam:data_2615	edam:data_2615	Unique identifier of an entry from the MINT database of protein-protein inter...	Title: MINT ID
edam:data_2616	edam:data_2616	Unique identifier of an entry from the DIP database of protein-protein intera...	Title: DIP ID
edam:data_2617	edam:data_2617	Unique identifier of a protein listed in the UCSD-Nature Signaling Gateway Mo...	Title: Signaling Gateway protein ID
edam:data_2618	edam:data_2618	Identifier of a protein modification catalogued in a database	Title: Protein modification ID
edam:data_2619	edam:data_2619	Identifier of a protein modification catalogued in the RESID database	Title: RESID ID
edam:data_2620	edam:data_2620	Identifier of an entry from the RGD database	Title: RGD ID
edam:data_2621	edam:data_2621	Identifier of a protein sequence from the TAIR database	Title: TAIR accession (protein)
edam:data_2622	edam:data_2622	Identifier of a small molecule metabolite from the Human Metabolome Database ...	Title: Compound ID (HMDB)
edam:data_2625	edam:data_2625	Identifier of an entry from the LIPID MAPS database	Title: LIPID MAPS ID
edam:data_2626	edam:data_2626	Identifier of a peptide from the PeptideAtlas peptide databases	Title: PeptideAtlas ID
edam:data_2628	edam:data_2628	A unique identifier of an interaction from the BioGRID database	Title: BioGRID interaction ID
edam:data_2629	edam:data_2629	Unique identifier of a peptidase enzyme from the MEROPS database	Title: Enzyme ID (MEROPS)
edam:data_2630	edam:data_2630	An identifier of a mobile genetic element	Title: Mobile genetic element ID
edam:data_2631	edam:data_2631	An identifier of a mobile genetic element from the Aclame database	Title: ACLAME ID
edam:data_2632	edam:data_2632	Identifier of an entry from the Saccharomyces genome database (SGD)	Title: SGD ID
edam:data_2633	edam:data_2633	Unique identifier of a book	Title: Book ID
edam:data_2634	edam:data_2634	The International Standard Book Number (ISBN) is for identifying printed book...	Title: ISBN
edam:data_2635	edam:data_2635	Identifier of a metabolite from the 3DMET database	Title: Compound ID (3DMET)
edam:data_2636	edam:data_2636	A unique identifier of an interaction from the MatrixDB database	Title: MatrixDB interaction ID
edam:data_2637	edam:data_2637	A unique identifier for pathways, reactions, complexes and small molecules fr...	Title: cPath ID
edam:data_2638	edam:data_2638	Identifier of an assay from the PubChem database	Title: PubChem bioassay ID
edam:data_2639	edam:data_2639	Identifier of an entry from the PubChem database	Title: PubChem ID
edam:data_2641	edam:data_2641	Identifier of an enzyme reaction mechanism from the MACie database	Title: Reaction ID (MACie)
edam:data_2642	edam:data_2642	Identifier for a gene from the miRBase database	Title: Gene ID (miRBase)
edam:data_2643	edam:data_2643	Identifier for a gene from the Zebrafish information network genome (ZFIN) da...	Title: Gene ID (ZFIN)
edam:data_2644	edam:data_2644	Identifier of an enzyme-catalysed reaction from the Rhea database	Title: Reaction ID (Rhea)
edam:data_2645	edam:data_2645	Identifier of a biological pathway from the Unipathway database	Title: Pathway ID (Unipathway)
edam:data_2646	edam:data_2646	Identifier of a small molecular from the ChEMBL database	Title: Compound ID (ChEMBL)
edam:data_2647	edam:data_2647	Unique identifier of an entry from the Ligand-gated ion channel (LGICdb) data...	Title: LGICdb identifier
edam:data_2648	edam:data_2648	Identifier of a biological reaction (kinetics entry) from the SABIO-RK reacti...	Title: Reaction kinetics ID (SABIO-RK)
edam:data_2649	edam:data_2649	Identifier of an entry from the pharmacogenetics and pharmacogenomics knowled...	Title: PharmGKB ID
edam:data_2650	edam:data_2650	Identifier of a pathway from the pharmacogenetics and pharmacogenomics knowle...	Title: Pathway ID (PharmGKB)
edam:data_2651	edam:data_2651	Identifier of a disease from the pharmacogenetics and pharmacogenomics knowle...	Title: Disease ID (PharmGKB)
edam:data_2652	edam:data_2652	Identifier of a drug from the pharmacogenetics and pharmacogenomics knowledge...	Title: Drug ID (PharmGKB)
edam:data_2653	edam:data_2653	Identifier of a drug from the Therapeutic Target Database (TTD)	Title: Drug ID (TTD)
edam:data_2654	edam:data_2654	Identifier of a target protein from the Therapeutic Target Database (TTD)	Title: Target ID (TTD)
edam:data_2655	edam:data_2655	A unique identifier of a type or group of cells	Title: Cell type identifier
edam:data_2656	edam:data_2656	A unique identifier of a neuron from the NeuronDB database	Title: NeuronDB ID
edam:data_2657	edam:data_2657	A unique identifier of a neuron from the NeuroMorpho database	Title: NeuroMorpho ID
edam:data_2658	edam:data_2658	Identifier of a chemical from the ChemIDplus database	Title: Compound ID (ChemIDplus)
edam:data_2659	edam:data_2659	Identifier of a pathway from the Small Molecule Pathway Database (SMPDB)	Title: Pathway ID (SMPDB)
edam:data_2660	edam:data_2660	Identifier of an entry from the BioNumbers database of key numbers and associ...	Title: BioNumbers ID
edam:data_2662	edam:data_2662	Unique identifier of a toxin from the Toxin and Toxin Target Database (T3DB) ...	Title: T3DB ID
edam:data_2663	edam:data_2663	Identifier of a carbohydrate	Title: Carbohydrate identifier
edam:data_2664	edam:data_2664	Identifier of an entry from the GlycomeDB database	Title: GlycomeDB ID
edam:data_2665	edam:data_2665	Identifier of an entry from the LipidBank database	Title: LipidBank ID
edam:data_2666	edam:data_2666	Identifier of a conserved domain from the Conserved Domain Database	Title: CDD ID
edam:data_2667	edam:data_2667	An identifier of an entry from the MMDB database	Title: MMDB ID
edam:data_2668	edam:data_2668	Unique identifier of an entry from the iRefIndex database of protein-protein ...	Title: iRefIndex ID
edam:data_2669	edam:data_2669	Unique identifier of an entry from the ModelDB database	Title: ModelDB ID
edam:data_2670	edam:data_2670	Identifier of a signaling pathway from the Database of Quantitative Cellular ...	Title: Pathway ID (DQCS)
edam:data_2700	edam:data_2700	Identifier of a protein domain (or other node) from the CATH database	Title: CATH identifier
edam:data_2701	edam:data_2701	A code number identifying a family from the CATH database	Title: CATH node ID (family)
edam:data_2702	edam:data_2702	Identifier of an enzyme from the CAZy enzymes database	Title: Enzyme ID (CAZy)
edam:data_2704	edam:data_2704	A unique identifier assigned by the I	Title: Clone ID (IMAGE)
edam:data_2705	edam:data_2705	An identifier of a 'cellular component' concept from the Gene Ontology	Title: GO concept ID (cellular component)
edam:data_2706	edam:data_2706	Name of a chromosome as used in the BioCyc database	Title: Chromosome name (BioCyc)
edam:data_2709	edam:data_2709	An identifier of a gene expression profile from the CleanEx database	Title: CleanEx entry name
edam:data_2710	edam:data_2710	An identifier of (typically a list of) gene expression experiments catalogued...	Title: CleanEx dataset code
edam:data_2711	edam:data_2711	A human-readable collection of information concerning a genome as a whole	Title: Genome report
edam:data_2713	edam:data_2713	Unique identifier for a protein complex from the CORUM database	Title: Protein ID (CORUM)
edam:data_2714	edam:data_2714	Unique identifier of a position-specific scoring matrix from the CDD database	Title: CDD PSSM-ID
edam:data_2715	edam:data_2715	Unique identifier for a protein from the CuticleDB database	Title: Protein ID (CuticleDB)
edam:data_2716	edam:data_2716	Identifier of a predicted transcription factor from the DBD database	Title: DBD ID
edam:data_2717	edam:data_2717	General annotation on an oligonucleotide probe, or a set of probes	Title: Oligonucleotide probe annotation
edam:data_2718	edam:data_2718	Identifier of an oligonucleotide from a database	Title: Oligonucleotide ID
edam:data_2719	edam:data_2719	Identifier of an oligonucleotide probe from the dbProbe database	Title: dbProbe ID
edam:data_2720	edam:data_2720	Physicochemical property data for one or more dinucleotides	Title: Dinucleotide property
edam:data_2721	edam:data_2721	Identifier of an dinucleotide property from the DiProDB database	Title: DiProDB ID
edam:data_2723	edam:data_2723	Unique identifier for a protein from the DisProt database	Title: Protein ID (DisProt)
edam:data_2725	edam:data_2725	Unique identifier for a gene transcript from the Ensembl database	Title: Ensembl transcript ID
edam:data_2727	edam:data_2727	An identifier of a promoter of a gene that is catalogued in a database	Title: Promoter ID
edam:data_2728	edam:data_2728	Identifier of an EST sequence	Title: EST accession
edam:data_2729	edam:data_2729	Identifier of an EST sequence from the COGEME database	Title: COGEME EST ID
edam:data_2730	edam:data_2730	A unisequence is a single sequence assembled from ESTs	Title: COGEME unisequence ID
edam:data_2731	edam:data_2731	Accession number of an entry (protein family) from the GeneFarm database	Title: Protein family ID (GeneFarm)
edam:data_2732	edam:data_2732	The name of a family of organism	Title: Family name
edam:data_2736	edam:data_2736	A feature identifier as used in the SwissRegulon database	Title: Sequence feature ID (SwissRegulon)
edam:data_2737	edam:data_2737	A FIG ID consists of four parts: a prefix, genome id, locus type and id numbe...	Title: FIG ID
edam:data_2738	edam:data_2738	A unique identifier of gene in the Xenbase database	Title: Gene ID (Xenbase)
edam:data_2739	edam:data_2739	A unique identifier of gene in the Genolist database	Title: Gene ID (Genolist)
edam:data_2741	edam:data_2741	Identifier of an entry (promoter) from the ABS database	Title: ABS ID
edam:data_2742	edam:data_2742	Identifier of a transcription factor from the AraC-XylS database	Title: AraC-XylS ID
edam:data_2744	edam:data_2744	Identifier of a locus from the PseudoCAP database	Title: Locus ID (PseudoCAP)
edam:data_2745	edam:data_2745	Identifier of a locus from the UTR database	Title: Locus ID (UTR)
edam:data_2746	edam:data_2746	Unique identifier of a monosaccharide from the MonosaccharideDB database	Title: MonosaccharideDB ID
edam:data_2749	edam:data_2749	An identifier of a particular genome	Title: Genome identifier
edam:data_2752	edam:data_2752	Identifier of an entry from the GlycoMapsDB (Glycosciences	Title: GlycoMap ID
edam:data_2753	edam:data_2753	A conformational energy map of the glycosidic linkages in a carbohydrate mole...	Title: Carbohydrate conformational map
edam:data_2755	edam:data_2755	The name of a transcription factor	Title: Transcription factor name
edam:data_2756	edam:data_2756	Identifier of a membrane transport proteins from the transport classification...	Title: TCID
edam:data_2757	edam:data_2757	Name of a domain from the Pfam database	Title: Pfam domain name
edam:data_2758	edam:data_2758	Accession number of a Pfam clan	Title: Pfam clan ID
edam:data_2759	edam:data_2759	Identifier for a gene from the VectorBase database	Title: Gene ID (VectorBase)
edam:data_2761	edam:data_2761	Identifier of an entry from the UTRSite database of regulatory motifs in euka...	Title: UTRSite ID
edam:data_2762	edam:data_2762	An informative report about a specific or conserved pattern in a molecular se...	Title: Sequence signature report
edam:data_2764	edam:data_2764	Official name of a protein as used in the UniProt database	Title: Protein name (UniProt)
edam:data_2766	edam:data_2766	Name of a protein family from the HAMAP database	Title: HAMAP ID
edam:data_2769	edam:data_2769	Identifier of a RNA transcript	Title: Transcript ID
edam:data_2770	edam:data_2770	Identifier of an RNA transcript from the H-InvDB database	Title: HIT ID
edam:data_2771	edam:data_2771	A unique identifier of gene cluster in the H-InvDB database	Title: HIX ID
edam:data_2772	edam:data_2772	Identifier of a antibody from the HPA database	Title: HPA antibody id
edam:data_2773	edam:data_2773	Identifier of a human major histocompatibility complex (HLA) or other protein...	Title: IMGT/HLA ID
edam:data_2774	edam:data_2774	A unique identifier of gene assigned by the J	Title: Gene ID (JCVI)
edam:data_2775	edam:data_2775	The name of a kinase protein	Title: Kinase name
edam:data_2776	edam:data_2776	Identifier of a physical entity from the ConsensusPathDB database	Title: ConsensusPathDB entity ID
edam:data_2777	edam:data_2777	Name of a physical entity from the ConsensusPathDB database	Title: ConsensusPathDB entity name
edam:data_2778	edam:data_2778	The number of a strain of algae and protozoa from the CCAP database	Title: CCAP strain number
edam:data_2779	edam:data_2779	An identifier of stock from a catalogue of biological resources	Title: Stock number
edam:data_2780	edam:data_2780	A stock number from The Arabidopsis information resource (TAIR)	Title: Stock number (TAIR)
edam:data_2781	edam:data_2781	Identifier of an entry from the RNA editing database (REDIdb)	Title: REDIdb ID
edam:data_2782	edam:data_2782	Name of a domain from the SMART database	Title: SMART domain name
edam:data_2783	edam:data_2783	Accession number of an entry (family) from the PANTHER database	Title: Protein family ID (PANTHER)
edam:data_2784	edam:data_2784	A unique identifier for a virus from the RNAVirusDB database	Title: RNAVirusDB ID
edam:data_2785	edam:data_2785	An accession of annotation on a (group of) viruses (catalogued in a database)	Title: Virus identifier
edam:data_2786	edam:data_2786	An identifier of a genome project assigned by NCBI	Title: NCBI Genome Project ID
edam:data_2787	edam:data_2787	A unique identifier of a whole genome assigned by the NCBI	Title: NCBI genome accession
edam:data_2789	edam:data_2789	Unique identifier for a membrane protein from the TopDB database	Title: Protein ID (TopDB)
edam:data_2790	edam:data_2790	Identifier of a two-dimensional (protein) gel	Title: Gel ID
edam:data_2791	edam:data_2791	Name of a reference map gel from the SWISS-2DPAGE database	Title: Reference map name (SWISS-2DPAGE)
edam:data_2792	edam:data_2792	Unique identifier for a peroxidase protein from the PeroxiBase database	Title: Protein ID (PeroxiBase)
edam:data_2793	edam:data_2793	Identifier of an entry from the SISYPHUS database of tertiary structure align...	Title: SISYPHUS ID
edam:data_2794	edam:data_2794	Accession of an open reading frame (catalogued in a database)	Title: ORF ID
edam:data_2795	edam:data_2795	An identifier of an open reading frame	Title: ORF identifier
edam:data_2796	edam:data_2796	Identifier of an entry from the GlycosciencesDB database	Title: LINUCS ID
edam:data_2797	edam:data_2797	Unique identifier for a ligand-gated ion channel protein from the LGICdb data...	Title: Protein ID (LGICdb)
edam:data_2798	edam:data_2798	Identifier of an EST sequence from the MaizeDB database	Title: MaizeDB ID
edam:data_2799	edam:data_2799	A unique identifier of gene in the MfunGD database	Title: Gene ID (MfunGD)
edam:data_2800	edam:data_2800	An identifier of a disease from the Orpha database	Title: Orpha number
edam:data_2802	edam:data_2802	Unique identifier for a protein from the EcID database	Title: Protein ID (EcID)
edam:data_2803	edam:data_2803	A unique identifier of a cDNA molecule catalogued in the RefSeq database	Title: Clone ID (RefSeq)
edam:data_2804	edam:data_2804	Unique identifier for a cone snail toxin protein from the ConoServer database	Title: Protein ID (ConoServer)
edam:data_2805	edam:data_2805	Identifier of a GeneSNP database entry	Title: GeneSNP ID
edam:data_2812	edam:data_2812	Identifier of a lipid	Title: Lipid identifier
edam:data_2835	edam:data_2835	Identifier for a gene from the VBASE2 database	Title: Gene ID (VBASE2)
edam:data_2836	edam:data_2836	A unique identifier for a virus from the DPVweb database	Title: DPVweb ID
edam:data_2837	edam:data_2837	Identifier of a pathway from the BioSystems pathway database	Title: Pathway ID (BioSystems)
edam:data_2849	edam:data_2849	An abstract of a scientific article	Title: Abstract
edam:data_2850	edam:data_2850	3D coordinate and associated data for a lipid structure	Title: Lipid structure
edam:data_2851	edam:data_2851	3D coordinate and associated data for the (3D) structure of a drug	Title: Drug structure
edam:data_2852	edam:data_2852	3D coordinate and associated data for the (3D) structure of a toxin	Title: Toxin structure
edam:data_2854	edam:data_2854	A simple matrix of numbers, where each value (or column of values) is derived...	Title: Position-specific scoring matrix
edam:data_2855	edam:data_2855	A matrix of distances between molecular entities, where a value (distance) is...	Title: Distance matrix
edam:data_2856	edam:data_2856	Distances (values representing similarity) between a group of molecular struc...	Title: Structural distance matrix
edam:data_2858	edam:data_2858	A concept from a biological ontology	Title: Ontology concept
edam:data_2865	edam:data_2865	A numerical measure of differences in the frequency of occurrence of synonymo...	Title: Codon usage bias
edam:data_2870	edam:data_2870	A map showing distance between genetic markers estimated by radiation-induced...	Title: Radiation hybrid map
edam:data_2872	edam:data_2872	A simple list of data identifiers (such as database accessions), possibly wit...	Title: ID list
edam:data_2873	edam:data_2873	Gene frequencies data that may be read during phylogenetic tree calculation	Title: Phylogenetic gene frequencies data
edam:data_2877	edam:data_2877	3D coordinate and associated data for a multi-protein complex; two or more po...	Title: Protein complex
edam:data_2878	edam:data_2878	3D coordinate and associated data for a protein (3D) structural motif; any gr...	Title: Protein structural motif
edam:data_2879	edam:data_2879	A human-readable collection of information about one or more specific lipid 3...	Title: Lipid report
edam:data_2884	edam:data_2884	Biological data that has been plotted as a graph of some type, or plotting in...	Title: Plot
edam:data_2886	edam:data_2886	A protein sequence and associated metadata	Title: Protein sequence record
edam:data_2887	edam:data_2887	A nucleic acid sequence and associated metadata	Title: Nucleic acid sequence record
edam:data_2891	edam:data_2891	Accession of a mathematical model, typically an entry from a database	Title: Biological model accession
edam:data_2892	edam:data_2892	The name of a type or group of cells	Title: Cell type name
edam:data_2893	edam:data_2893	Accession of a type or group of cells (catalogued in a database)	Title: Cell type accession
edam:data_2894	edam:data_2894	Accession of an entry from a database of chemicals	Title: Compound accession
edam:data_2895	edam:data_2895	Accession of a drug	Title: Drug accession
edam:data_2896	edam:data_2896	Name of a toxin	Title: Toxin name
edam:data_2897	edam:data_2897	Accession of a toxin (catalogued in a database)	Title: Toxin accession
edam:data_2898	edam:data_2898	Accession of a monosaccharide (catalogued in a database)	Title: Monosaccharide accession
edam:data_2899	edam:data_2899	Common name of a drug	Title: Drug name
edam:data_2900	edam:data_2900	Accession of an entry from a database of carbohydrates	Title: Carbohydrate accession
edam:data_2901	edam:data_2901	Accession of a specific molecule (catalogued in a database)	Title: Molecule accession
edam:data_2902	edam:data_2902	Accession of a data definition (catalogued in a database)	Title: Data resource definition accession
edam:data_2903	edam:data_2903	An accession of a particular genome (in a database)	Title: Genome accession
edam:data_2904	edam:data_2904	An accession of a map of a molecular sequence (deposited in a database)	Title: Map accession
edam:data_2905	edam:data_2905	Accession of an entry from a database of lipids	Title: Lipid accession
edam:data_2906	edam:data_2906	Accession of a peptide deposited in a database	Title: Peptide ID
edam:data_2907	edam:data_2907	Accession of a protein deposited in a database	Title: Protein accession
edam:data_2908	edam:data_2908	An accession of annotation on a (group of) organisms (catalogued in a databas...	Title: Organism accession
edam:data_2909	edam:data_2909	The name of an organism (or group of organisms)	Title: Organism name
edam:data_2910	edam:data_2910	Accession of a protein family (that is deposited in a database)	Title: Protein family accession
edam:data_2911	edam:data_2911	Accession of an entry from a database of transcription factors or binding sit...	Title: Transcription factor accession
edam:data_2912	edam:data_2912	Accession number of a strain of an organism variant, typically a plant, virus...	Title: Strain accession
edam:data_2914	edam:data_2914	Metadata on sequence features	Title: Sequence features metadata
edam:data_2915	edam:data_2915	Identifier of a Gramene database entry	Title: Gramene identifier
edam:data_2916	edam:data_2916	An identifier of an entry from the DDBJ sequence database	Title: DDBJ accession
edam:data_2917	edam:data_2917	An identifier of an entity from the ConsensusPathDB database	Title: ConsensusPathDB identifier
edam:data_2955	edam:data_2955	An informative report of information about molecular sequence(s), including b...	Title: Sequence report
edam:data_2956	edam:data_2956	Data concerning the properties or features of one or more protein secondary s...	Title: Protein secondary structure
edam:data_2957	edam:data_2957	A Hopp and Woods plot of predicted antigenicity of a peptide or protein	Title: Hopp and Woods plot
edam:data_2968	edam:data_2968	Data (typically biological or biomedical) that has been rendered into an imag...	Title: Image
edam:data_2969	edam:data_2969	Image of a molecular sequence, possibly with sequence features or properties ...	Title: Sequence image
edam:data_2970	edam:data_2970	A report on protein properties concerning hydropathy	Title: Protein hydropathy data
edam:data_2976	edam:data_2976	One or more protein sequences, possibly with associated annotation	Title: Protein sequence
edam:data_2977	edam:data_2977	One or more nucleic acid sequences, possibly with associated annotation	Title: Nucleic acid sequence
edam:data_2978	edam:data_2978	Data concerning a biochemical reaction, typically data and more general annot...	Title: Reaction data
edam:data_2979	edam:data_2979	Data concerning small peptides	Title: Peptide property
edam:data_2984	edam:data_2984	An informative report concerning or derived from the analysis of a biological...	Title: Pathway or network report
edam:data_2985	edam:data_2985	A thermodynamic or kinetic property of a nucleic acid molecule	Title: Nucleic acid thermodynamic data
edam:data_2991	edam:data_2991	Geometry data for a protein structure, for example bond lengths, bond angles,...	Title: Protein geometry data
edam:data_2992	edam:data_2992	An image of protein structure	Title: Protein structure image
edam:data_2994	edam:data_2994	Weights for sequence positions or characters in phylogenetic analysis where z...	Title: Phylogenetic character weights
edam:data_3002	edam:data_3002	Annotation of one particular positional feature on a biomolecular (typically ...	Title: Annotation track
edam:data_3021	edam:data_3021	Accession number of a UniProt (protein sequence) database entry	Title: UniProt accession
edam:data_3022	edam:data_3022	Identifier of a genetic code in the NCBI list of genetic codes	Title: NCBI genetic code ID
edam:data_3025	edam:data_3025	Identifier of a concept in an ontology of biological or bioinformatics concep...	Title: Ontology concept identifier
edam:data_3028	edam:data_3028	Data concerning the classification, identification and naming of organisms	Title: Taxonomy
edam:data_3029	edam:data_3029	EMBL/GENBANK/DDBJ coding feature protein identifier, issued by International ...	Title: Protein ID (EMBL/GenBank/DDBJ)
edam:data_3034	edam:data_3034	Name or other identifier of molecular sequence feature(s)	Title: Sequence feature identifier
edam:data_3035	edam:data_3035	An identifier of a molecular tertiary structure, typically an entry from a st...	Title: Structure identifier
edam:data_3036	edam:data_3036	An identifier of an array of numerical values, such as a comparison matrix	Title: Matrix identifier
edam:data_3103	edam:data_3103	Unique identifier of a drug conforming to the Anatomical Therapeutic Chemical...	Title: ATC code
edam:data_3104	edam:data_3104	A unique, unambiguous, alphanumeric identifier of a chemical substance as cat...	Title: UNII
edam:data_3106	edam:data_3106	Metadata concerning the software, hardware or other aspects of a computer sys...	Title: System metadata
edam:data_3108	edam:data_3108	Raw data such as measurements or other results from laboratory experiments, a...	Title: Experimental measurement
edam:data_3110	edam:data_3110	Raw data (typically MIAME-compliant) for hybridisations from a microarray exp...	Title: Raw microarray data
edam:data_3111	edam:data_3111	Data generated from processing and analysis of probe set data from a microarr...	Title: Processed microarray data
edam:data_3112	edam:data_3112	The final processed (normalised) data for a set of hybridisations in a microa...	Title: Gene expression matrix
edam:data_3113	edam:data_3113	Annotation on a biological sample, for example experimental factors and their...	Title: Sample annotation
edam:data_3115	edam:data_3115	Annotation on the array itself used in a microarray experiment	Title: Microarray metadata
edam:data_3117	edam:data_3117	Data concerning the hybridisations measured during a microarray experiment	Title: Microarray hybridisation data
edam:data_3128	edam:data_3128	A human-readable collection of information about regions within a nucleic aci...	Title: Nucleic acid structure report
edam:data_3134	edam:data_3134	An informative report on features of a messenger RNA (mRNA) molecules includi...	Title: Gene transcript report
edam:data_3148	edam:data_3148	A human-readable collection of information about a particular family of genes...	Title: Gene family report
edam:data_3153	edam:data_3153	An image of a protein	Title: Protein image
edam:data_3181	edam:data_3181	An informative report about a DNA sequence assembly	Title: Sequence assembly report
edam:data_3210	edam:data_3210	An index of a genome sequence	Title: Genome index
edam:data_3236	edam:data_3236	Information might include start and end position in a chromosome sequence, ch...	Title: Cytoband position
edam:data_3238	edam:data_3238	Cell type ontology concept ID	Title: Cell type ontology ID
edam:data_3241	edam:data_3241	Mathematical model of a network, that contains biochemical kinetics	Title: Kinetic model
edam:data_3264	edam:data_3264	Identifier of a COSMIC database entry	Title: COSMIC ID
edam:data_3265	edam:data_3265	Identifier of a HGMD database entry	Title: HGMD ID
edam:data_3266	edam:data_3266	Unique identifier of sequence assembly	Title: Sequence assembly ID
edam:data_3270	edam:data_3270	Unique identifier for a gene tree from the Ensembl database	Title: Ensembl gene tree ID
edam:data_3271	edam:data_3271	A phylogenetic tree that is an estimate of the character's phylogeny	Title: Gene tree
edam:data_3272	edam:data_3272	A phylogenetic tree that reflects phylogeny of the taxa from which the charac...	Title: Species tree
edam:data_3273	edam:data_3273	Name or other identifier of an entry from a biosample database	Title: Sample ID
edam:data_3274	edam:data_3274	Identifier of an object from the MGI database	Title: MGI accession
edam:data_3275	edam:data_3275	Name of a phenotype	Title: Phenotype name
edam:data_3354	edam:data_3354	A HMM transition matrix contains the probabilities of switching from one HMM ...	Title: Transition matrix
edam:data_3355	edam:data_3355	A HMM emission matrix holds the probabilities of choosing the four nucleotide...	Title: Emission matrix
edam:data_3358	edam:data_3358	An identifier of a data format	Title: Format identifier
edam:data_3424	edam:data_3424	Raw biological or biomedical image generated by some experimental technique	Title: Raw image
edam:data_3425	edam:data_3425	Data concerning the intrinsic physical (e	Title: Carbohydrate property
edam:data_3442	edam:data_3442	An imaging technique that uses magnetic fields and radiowaves to form images,...	Title: MRI image
edam:data_3449	edam:data_3449	An image from a cell migration track assay	Title: Cell migration track image
edam:data_3451	edam:data_3451	Rate of association of a protein with another protein or some other molecule	Title: Rate of association
edam:data_3479	edam:data_3479	Multiple gene identifiers in a specific order	Title: Gene order
edam:data_3483	edam:data_3483	The spectrum of frequencies of electromagnetic radiation emitted from a molec...	Title: Spectrum
edam:data_3488	edam:data_3488	Spectral information for a molecule from a nuclear magnetic resonance experim...	Title: NMR spectrum
edam:data_3492	edam:data_3492	An informative report about a specific or conserved nucleic acid sequence pat...	Title: Nucleic acid signature
edam:data_3494	edam:data_3494	A DNA sequence	Title: DNA sequence
edam:data_3495	edam:data_3495	An RNA sequence	Title: RNA sequence
edam:data_3498	edam:data_3498	Data on gene sequence variations resulting large-scale genotyping and DNA seq...	Title: Sequence variations
edam:data_3505	edam:data_3505	A list of publications such as scientic papers or books	Title: Bibliography
edam:data_3509	edam:data_3509	A mapping of supplied textual terms or phrases to ontology concepts (URIs)	Title: Ontology mapping
edam:data_3546	edam:data_3546	Any data concerning a specific biological or biomedical image	Title: Image metadata
edam:data_3558	edam:data_3558	A human-readable collection of information concerning a clinical trial	Title: Clinical trial report
edam:data_3567	edam:data_3567	A report about a biosample	Title: Reference sample report
edam:data_3568	edam:data_3568	Accession number of an entry from the Gene Expression Atlas	Title: Gene Expression Atlas Experiment ID
edam:data_3667	edam:data_3667	Identifier of an entry from a database of disease	Title: Disease identifier
edam:data_3668	edam:data_3668	The name of some disease	Title: Disease name
edam:data_3669	edam:data_3669	Learning material is a document or another digital object that is designed fo...	Title: Learning material
edam:data_3670	edam:data_3670	A training course available for use on the Web	Title: Online course
edam:data_3671	edam:data_3671	Any free or plain text, typically for human consumption and in English	Title: Text
edam:data_3707	edam:data_3707	Machine-readable biodiversity data	Title: Biodiversity data
edam:data_3716	edam:data_3716	A human-readable collection of information concerning biosafety data	Title: Biosafety report
edam:data_3717	edam:data_3717	A report about any kind of isolation of biological material	Title: Isolation report
edam:data_3718	edam:data_3718	Information about the ability of an organism to cause disease in a correspond...	Title: Pathogenicity report
edam:data_3719	edam:data_3719	Information about the biosafety classification of an organism according to co...	Title: Biosafety classification
edam:data_3720	edam:data_3720	A report about localisation of the isolaton of biological material e	Title: Geographic location
edam:data_3721	edam:data_3721	A report about any kind of isolation source of biological material e	Title: Isolation source
edam:data_3722	edam:data_3722	Experimentally determined parameter of the physiology of an organism, e	Title: Physiology parameter
edam:data_3723	edam:data_3723	Experimentally determined parameter of the morphology of an organism, e	Title: Morphology parameter
edam:data_3724	edam:data_3724	Experimental determined parameter for the cultivation of an organism	Title: Cultivation parameter
edam:data_3732	edam:data_3732	Data concerning a sequencing experiment, that may be specified as an input to...	Title: Sequencing metadata name
edam:data_3733	edam:data_3733	A flow cell is used to immobilise, amplify and sequence millions of molecules...	Title: Flow cell identifier
edam:data_3734	edam:data_3734	An identifier of a lane within a flow cell of a sequencing machine, within wh...	Title: Lane identifier
edam:data_3735	edam:data_3735	A number corresponding to the number of an analysis performed by a sequencing...	Title: Run number
edam:data_3736	edam:data_3736	Data concerning ecology; for example measurements and reports from the study ...	Title: Ecological data
edam:data_3737	edam:data_3737	The mean species diversity in sites or habitats at a local scale	Title: Alpha diversity data
edam:data_3738	edam:data_3738	The ratio between regional and local species diversity	Title: Beta diversity data
edam:data_3739	edam:data_3739	The total species diversity in a landscape	Title: Gamma diversity data
edam:data_3743	edam:data_3743	A plot in which community data (e	Title: Ordination plot
edam:data_3753	edam:data_3753	A ranked list of categories (usually ontology concepts), each associated with...	Title: Over-representation data
edam:data_3754	edam:data_3754	A ranked list of Gene Ontology concepts, each associated with a p-value, conc...	Title: GO-term enrichment data
edam:data_3756	edam:data_3756	Score for localization of one or more post-translational modifications in pep...	Title: Localisation score
edam:data_3757	edam:data_3757	Identifier of a protein modification catalogued in the Unimod database	Title: Unimod ID
edam:data_3759	edam:data_3759	Identifier for mass spectrometry proteomics data in the proteomexchange	Title: ProteomeXchange ID
edam:data_3768	edam:data_3768	Groupings of expression profiles according to a clustering algorithm	Title: Clustered expression profiles
edam:data_3769	edam:data_3769	An identifier of a concept from the BRENDA ontology	Title: BRENDA ontology concept ID
edam:data_3779	edam:data_3779	A text (such as a scientific article), annotated with notes, data and metadat...	Title: Annotated text
edam:data_3786	edam:data_3786	A structured query, in form of a script, that defines a database search task	Title: Query script
edam:data_3805	edam:data_3805	Structural 3D model (volume map) from electron microscopy	Title: 3D EM Map
edam:data_3806	edam:data_3806	Annotation on a structural 3D EM Map from electron microscopy	Title: 3D EM Mask
edam:data_3807	edam:data_3807	Raw DDD movie acquisition from electron microscopy	Title: EM Movie
edam:data_3808	edam:data_3808	Raw acquisition from electron microscopy or average of an aligned DDD movie	Title: EM Micrograph
edam:data_3842	edam:data_3842	Data coming from molecular simulations, computer "experiments" on model molec...	Title: Molecular simulation data
edam:data_3856	edam:data_3856	Identifier of an entry from the RNA central database of annotated human miRNA...	Title: RNA central ID
edam:data_3861	edam:data_3861	A human-readable systematic collection of patient (or population) health info...	Title: Electronic health record
edam:data_3869	edam:data_3869	Data coming from molecular simulations, computer "experiments" on model molec...	Title: Simulation
edam:data_3870	edam:data_3870	Dynamic information of a structure molecular system coming from a molecular s...	Title: Trajectory data
edam:data_3871	edam:data_3871	Force field parameters: charges, masses, radii, bond lengths, bond dihedrals,...	Title: Forcefield parameters
edam:data_3872	edam:data_3872	Static information of a structure molecular system that is needed for a molec...	Title: Topology data
edam:data_3905	edam:data_3905	Visualization of distribution of quantitative data, e	Title: Histogram
edam:data_3914	edam:data_3914	Report of the quality control review that was made of factors involved in a p...	Title: Quality control report
edam:data_3917	edam:data_3917	A table of unnormalized values representing summarised read counts per genomi...	Title: Count matrix
edam:data_3924	edam:data_3924	Alignment (superimposition) of DNA tertiary (3D) structures	Title: DNA structure alignment
edam:data_3932	edam:data_3932	A score derived from the P-value to ensure correction for multiple tests	Title: Q-value
edam:data_3949	edam:data_3949	A profile HMM is a variant of a Hidden Markov model that is derived specifica...	Title: Profile HMM
edam:data_3952	edam:data_3952	Identifier of a pathway from the WikiPathways pathway database	Title: Pathway ID (WikiPathways)
edam:data_3953	edam:data_3953	A ranked list of pathways, each associated with z-score, p-value or similar, ...	Title: Pathway overrepresentation data
edam:data_4022	edam:data_4022	Identifier of a researcher registered with the ORCID database	Title: ORCID Identifier
edam:data_4040	edam:data_4040	Data management plan is a document describing the data management of a projec...	Title: Data management plan

Identifier and Mapping Information

Schema Source

• from schema: https://includedcc.org/cam-expanded-enums

LinkML Source

name: EnumEDAMDataTypes
description: Data types from the EDAM ontology.
from_schema: https://includedcc.org/cam-expanded-enums
rank: 1000
permissible_values:
  edam:data_0582:
    text: edam:data_0582
    description: An ontology of biological or bioinformatics concepts and relations,
      a controlled vocabulary, structured glossary etc.
    meaning: edam:data_0582
    title: Ontology
  edam:data_0842:
    text: edam:data_0842
    description: A text token, number or something else which identifies an entity,
      but which may not be persistent (stable) or unique (the same identifier may
      identify multiple things).
    meaning: edam:data_0842
    title: Identifier
  edam:data_0844:
    text: edam:data_0844
    description: Mass of a molecule.
    meaning: edam:data_0844
    title: Molecular mass
  edam:data_0845:
    text: edam:data_0845
    description: Net charge of a molecule.
    meaning: edam:data_0845
    title: Molecular charge
  edam:data_0846:
    text: edam:data_0846
    description: A specification of a chemical structure.
    meaning: edam:data_0846
    title: Chemical formula
  edam:data_0847:
    text: edam:data_0847
    description: 'A QSAR quantitative descriptor (name-value pair) of chemical structure.

      QSAR descriptors have numeric values that quantify chemical information encoded
      in a symbolic representation of a molecule. They are used in quantitative structure
      activity relationship (QSAR) applications. Many subtypes of individual descriptors
      (not included in EDAM) cover various types of protein properties.'
    meaning: edam:data_0847
    title: QSAR descriptor
  edam:data_0849:
    text: edam:data_0849
    description: A molecular sequence and associated metadata.
    meaning: edam:data_0849
    title: Sequence record
  edam:data_0850:
    text: edam:data_0850
    description: 'A collection of one or typically multiple molecular sequences (which
      can include derived data or metadata) that do not (typically) correspond to
      molecular sequence database records or entries and which (typically) are derived
      from some analytical method.

      An example is an alignment reference; one or a set of reference molecular sequences,
      structures, or profiles used for alignment of genomic, transcriptomic, or proteomic
      experimental data.

      This concept may be used for arbitrary sequence sets and associated data arising
      from processing.'
    meaning: edam:data_0850
    title: Sequence set
  edam:data_0856:
    text: edam:data_0856
    description: 'How the annotation of a sequence feature (for example in EMBL or
      Swiss-Prot) was derived.

      This might be the name and version of a software tool, the name of a database,
      or ''curated'' to indicate a manual annotation (made by a human).'
    meaning: edam:data_0856
    title: Sequence feature source
  edam:data_0857:
    text: edam:data_0857
    description: 'A report of sequence hits and associated data from searching a database
      of sequences (for example a BLAST search). This will typically include a list
      of scores (often with statistical evaluation) and a set of alignments for the
      hits.

      The score list includes the alignment score, percentage of the query sequence
      matched, length of the database sequence entry in this alignment, identifier
      of the database sequence entry, excerpt of the database sequence entry description
      etc.'
    meaning: edam:data_0857
    title: Sequence search results
  edam:data_0858:
    text: edam:data_0858
    description: 'A "profile-profile alignment" is an alignment of two sequence profiles,
      each profile typically representing a sequence alignment.

      A "sequence-profile alignment" is an alignment of one or more molecular sequence(s)
      to one or more sequence profile(s) (each profile typically representing a sequence
      alignment).

      Report on the location of matches ("hits") between sequences, sequence profiles,
      motifs (conserved or functional patterns) and other types of sequence signatures.

      This includes reports of hits from a search of a protein secondary or domain
      database. Data associated with the search or alignment might also be included,
      e.g. ranked list of best-scoring sequences, a graphical representation of scores
      etc.'
    meaning: edam:data_0858
    title: Sequence signature matches
  edam:data_0860:
    text: edam:data_0860
    description: 'Sequence signature data concerns specific or conserved pattern in
      molecular sequences and the classifiers used for their identification, including
      sequence motifs, profiles or other diagnostic element.

      This can include metadata about a motif or sequence profile such as its name,
      length, technical details about the profile construction, and so on.'
    meaning: edam:data_0860
    title: Sequence signature data
  edam:data_0862:
    text: edam:data_0862
    description: A dotplot of sequence similarities identified from word-matching
      or character comparison.
    meaning: edam:data_0862
    title: Dotplot
  edam:data_0863:
    text: edam:data_0863
    description: Alignment of multiple molecular sequences.
    meaning: edam:data_0863
    title: Sequence alignment
  edam:data_0865:
    text: edam:data_0865
    description: A value representing molecular sequence similarity.
    meaning: edam:data_0865
    title: Sequence similarity score
  edam:data_0867:
    text: edam:data_0867
    description: 'An informative report of molecular sequence alignment-derived data
      or metadata.

      Use this for any computer-generated reports on sequence alignments, and for
      general information (metadata) on a sequence alignment, such as a description,
      sequence identifiers and alignment score.'
    meaning: edam:data_0867
    title: Sequence alignment report
  edam:data_0870:
    text: edam:data_0870
    description: 'A matrix of estimated evolutionary distance between molecular sequences,
      such as is suitable for phylogenetic tree calculation.

      Methods might perform character compatibility analysis or identify patterns
      of similarity in an alignment or data matrix.'
    meaning: edam:data_0870
    title: Sequence distance matrix
  edam:data_0871:
    text: edam:data_0871
    description: 'As defined, this concept would also include molecular sequences,
      microsatellites, polymorphisms (RAPDs, RFLPs, or AFLPs), restriction sites and
      fragments

      Basic character data from which a phylogenetic tree may be generated.'
    meaning: edam:data_0871
    title: Phylogenetic character data
  edam:data_0872:
    text: edam:data_0872
    description: 'A phylogenetic tree is usually constructed from a set of sequences
      from which an alignment (or data matrix) is calculated. See also ''Phylogenetic
      tree image''.

      The raw data (not just an image) from which a phylogenetic tree is directly
      generated or plotted, such as topology, lengths (in time or in expected amounts
      of variance) and a confidence interval for each length.'
    meaning: edam:data_0872
    title: Phylogenetic tree
  edam:data_0874:
    text: edam:data_0874
    description: 'Matrix of integer or floating point numbers for amino acid or nucleotide
      sequence comparison.

      The comparison matrix might include matrix name, optional comment, height and
      width (or size) of matrix, an index row/column (of characters) and data rows/columns
      (of integers or floats).'
    meaning: edam:data_0874
    title: Comparison matrix
  edam:data_0878:
    text: edam:data_0878
    description: Alignment of the (1D representations of) secondary structure of two
      or more proteins.
    meaning: edam:data_0878
    title: Protein secondary structure alignment
  edam:data_0880:
    text: edam:data_0880
    description: 'An informative report of secondary structure (predicted or real)
      of an RNA molecule.

      This includes thermodynamically stable or evolutionarily conserved structures
      such as knots, pseudoknots etc.'
    meaning: edam:data_0880
    title: RNA secondary structure
  edam:data_0881:
    text: edam:data_0881
    description: Alignment of the (1D representations of) secondary structure of two
      or more RNA molecules.
    meaning: edam:data_0881
    title: RNA secondary structure alignment
  edam:data_0883:
    text: edam:data_0883
    description: '3D coordinate and associated data for a macromolecular tertiary
      (3D) structure or part of a structure.

      The coordinate data may be predicted or real.'
    meaning: edam:data_0883
    title: Structure
  edam:data_0886:
    text: edam:data_0886
    description: 'A tertiary structure alignment will include the untransformed coordinates
      of one macromolecule, followed by the second (or subsequent) structure(s) with
      all the coordinates transformed (by rotation / translation) to give a superposition.

      Alignment (superimposition) of molecular tertiary (3D) structures.'
    meaning: edam:data_0886
    title: Structure alignment
  edam:data_0887:
    text: edam:data_0887
    description: 'An informative report of molecular tertiary structure alignment-derived
      data.

      This is a broad data type and is used a placeholder for other, more specific
      types.'
    meaning: edam:data_0887
    title: Structure alignment report
  edam:data_0888:
    text: edam:data_0888
    description: A value representing molecular structure similarity, measured from
      structure alignment or some other type of structure comparison.
    meaning: edam:data_0888
    title: Structure similarity score
  edam:data_0889:
    text: edam:data_0889
    description: Some type of structural (3D) profile or template (representing a
      structure or structure alignment).
    meaning: edam:data_0889
    title: Structural profile
  edam:data_0890:
    text: edam:data_0890
    description: A 3D profile-3D profile alignment (each profile representing structures
      or a structure alignment).
    meaning: edam:data_0890
    title: Structural (3D) profile alignment
  edam:data_0892:
    text: edam:data_0892
    description: Matrix of values used for scoring sequence-structure compatibility.
    meaning: edam:data_0892
    title: Protein sequence-structure scoring matrix
  edam:data_0893:
    text: edam:data_0893
    description: An alignment of molecular sequence to structure (from threading sequence(s)
      through 3D structure or representation of structure(s)).
    meaning: edam:data_0893
    title: Sequence-structure alignment
  edam:data_0896:
    text: edam:data_0896
    description: An informative human-readable report about one or more specific protein
      molecules or protein structural domains, derived from analysis of primary (sequence
      or structural) data.
    meaning: edam:data_0896
    title: Protein report
  edam:data_0897:
    text: edam:data_0897
    description: 'A report of primarily non-positional data describing intrinsic physical,
      chemical or other properties of a protein molecule or model.

      This is a broad data type and is used a placeholder for other, more specific
      types. Data may be based on analysis of nucleic acid sequence or structural
      data, for example reports on the surface properties (shape, hydropathy, electrostatic
      patches etc) of a protein structure, protein flexibility or motion, and protein
      architecture (spatial arrangement of secondary structure).'
    meaning: edam:data_0897
    title: Protein property
  edam:data_0905:
    text: edam:data_0905
    description: 'Protein-protein interaction data from for example yeast two-hybrid
      analysis, protein microarrays, immunoaffinity chromatography followed by mass
      spectrometry, phage display etc.

      This is a broad data type and is used a placeholder for other, more specific
      types. It is primarily intended to help navigation of EDAM and would not typically
      be used for annotation.'
    meaning: edam:data_0905
    title: Protein interaction raw data
  edam:data_0906:
    text: edam:data_0906
    description: Data concerning the interactions (predicted or known) within or between
      a protein, structural domain or part of a protein. This includes intra- and
      inter-residue contacts and distances, as well as interactions with other proteins
      and non-protein entities such as nucleic acid, metal atoms, water, ions etc.
    meaning: edam:data_0906
    title: Protein interaction data
  edam:data_0907:
    text: edam:data_0907
    description: An informative report on a specific protein family or other classification
      or group of protein sequences or structures.
    meaning: edam:data_0907
    title: Protein family report
  edam:data_0909:
    text: edam:data_0909
    description: The maximum initial velocity or rate of a reaction. It is the limiting
      velocity as substrate concentrations get very large.
    meaning: edam:data_0909
    title: Vmax
  edam:data_0910:
    text: edam:data_0910
    description: Km is the concentration (usually in Molar units) of substrate that
      leads to half-maximal velocity of an enzyme-catalysed reaction.
    meaning: edam:data_0910
    title: Km
  edam:data_0912:
    text: edam:data_0912
    description: 'A report of primarily non-positional data describing intrinsic physical,
      chemical or other properties of a nucleic acid molecule.

      Nucleic acid structural properties stiffness, curvature, twist/roll data or
      other conformational parameters or properties.

      This is a broad data type and is used a placeholder for other, more specific
      types.'
    meaning: edam:data_0912
    title: Nucleic acid property
  edam:data_0914:
    text: edam:data_0914
    description: 'Data derived from analysis of codon usage (typically a codon usage
      table) of DNA sequences.

      This is a broad data type and is used a placeholder for other, more specific
      types.'
    meaning: edam:data_0914
    title: Codon usage data
  edam:data_0916:
    text: edam:data_0916
    description: 'A report on predicted or actual gene structure, regions which make
      an RNA product and features such as promoters, coding regions, splice sites
      etc.

      This includes any report on a particular locus or gene. This might include the
      gene name, description, summary and so on. It can include details about the
      function of a gene, such as its encoded protein or a functional classification
      of the gene sequence along according to the encoded protein(s).'
    meaning: edam:data_0916
    title: Gene report
  edam:data_0919:
    text: edam:data_0919
    description: 'A human-readable collection of information about a specific chromosome.

      This includes basic information. e.g. chromosome number, length, karyotype features,
      chromosome sequence etc.'
    meaning: edam:data_0919
    title: Chromosome report
  edam:data_0920:
    text: edam:data_0920
    description: A human-readable collection of information about the set of genes
      (or allelic forms) present in an individual, organism or cell and associated
      with a specific physical characteristic, or a report concerning an organisms
      traits and phenotypes.
    meaning: edam:data_0920
    title: Genotype/phenotype report
  edam:data_0924:
    text: edam:data_0924
    description: 'Fluorescence trace data generated by an automated DNA sequencer,
      which can be interpreted as a molecular sequence (reads), given associated sequencing
      metadata such as base-call quality scores.

      This is the raw data produced by a DNA sequencing machine.'
    meaning: edam:data_0924
    title: Sequence trace
  edam:data_0925:
    text: edam:data_0925
    description: 'An assembly of fragments of a (typically genomic) DNA sequence.

      Typically, an assembly is a collection of contigs (for example ESTs and genomic
      DNA fragments) that are ordered, aligned and merged. Annotation of the assembled
      sequence might be included.'
    meaning: edam:data_0925
    title: Sequence assembly
  edam:data_0926:
    text: edam:data_0926
    description: 'Radiation Hybrid (RH) scores are used in Radiation Hybrid mapping.

      Radiation hybrid scores (RH) scores for one or more markers.'
    meaning: edam:data_0926
    title: RH scores
  edam:data_0927:
    text: edam:data_0927
    description: 'A human-readable collection of information about the linkage of
      alleles.

      This includes linkage disequilibrium; the non-random association of alleles
      or polymorphisms at two or more loci (not necessarily on the same chromosome).'
    meaning: edam:data_0927
    title: Genetic linkage report
  edam:data_0928:
    text: edam:data_0928
    description: Data quantifying the level of expression of (typically) multiple
      genes, derived for example from microarray experiments.
    meaning: edam:data_0928
    title: Gene expression profile
  edam:data_0937:
    text: edam:data_0937
    description: X-ray crystallography data.
    meaning: edam:data_0937
    title: Electron density map
  edam:data_0938:
    text: edam:data_0938
    description: Nuclear magnetic resonance (NMR) raw data, typically for a protein.
    meaning: edam:data_0938
    title: Raw NMR data
  edam:data_0939:
    text: edam:data_0939
    description: Protein secondary structure from protein coordinate or circular dichroism
      (CD) spectroscopic data.
    meaning: edam:data_0939
    title: CD spectra
  edam:data_0940:
    text: edam:data_0940
    description: Volume map data from electron microscopy.
    meaning: edam:data_0940
    title: Volume map
  edam:data_0942:
    text: edam:data_0942
    description: Two-dimensional gel electrophoresis image.
    meaning: edam:data_0942
    title: 2D PAGE image
  edam:data_0943:
    text: edam:data_0943
    description: Spectra from mass spectrometry.
    meaning: edam:data_0943
    title: Mass spectrum
  edam:data_0944:
    text: edam:data_0944
    description: 'A molecular weight standard fingerprint is standard protonated molecular
      masses e.g. from trypsin (modified porcine trypsin, Promega) and keratin peptides.

      A set of peptide masses (peptide mass fingerprint) from mass spectrometry.'
    meaning: edam:data_0944
    title: Peptide mass fingerprint
  edam:data_0945:
    text: edam:data_0945
    description: Protein or peptide identifications with evidence supporting the identifications,
      for example from comparing a peptide mass fingerprint (from mass spectrometry)
      to a sequence database, or the set of typical spectra one obtains when running
      a protein through a mass spectrometer.
    meaning: edam:data_0945
    title: Peptide identification
  edam:data_0949:
    text: edam:data_0949
    description: Basic information, annotation or documentation concerning a workflow
      (but not the workflow itself).
    meaning: edam:data_0949
    title: Workflow metadata
  edam:data_0950:
    text: edam:data_0950
    description: A biological model represented in mathematical terms.
    meaning: edam:data_0950
    title: Mathematical model
  edam:data_0951:
    text: edam:data_0951
    description: A value representing estimated statistical significance of some observed
      data; typically sequence database hits.
    meaning: edam:data_0951
    title: Statistical estimate score
  edam:data_0954:
    text: edam:data_0954
    description: 'A mapping of the accession numbers (or other database identifier)
      of entries between (typically) two biological or biomedical databases.

      The cross-mapping is typically a table where each row is an accession number
      and each column is a database being cross-referenced. The cells give the accession
      number or identifier of the corresponding entry in a database. If a cell in
      the table is not filled then no mapping could be found for the database. Additional
      information might be given on version, date etc.'
    meaning: edam:data_0954
    title: Database cross-mapping
  edam:data_0955:
    text: edam:data_0955
    description: An index of data of biological relevance.
    meaning: edam:data_0955
    title: Data index
  edam:data_0956:
    text: edam:data_0956
    description: A human-readable collection of information concerning an analysis
      of an index of biological data.
    meaning: edam:data_0956
    title: Data index report
  edam:data_0957:
    text: edam:data_0957
    description: Basic information on bioinformatics database(s) or other data sources
      such as name, type, description, URL etc.
    meaning: edam:data_0957
    title: Database metadata
  edam:data_0958:
    text: edam:data_0958
    description: Basic information about one or more bioinformatics applications or
      packages, such as name, type, description, or other documentation.
    meaning: edam:data_0958
    title: Tool metadata
  edam:data_0960:
    text: edam:data_0960
    description: Textual metadata on a software author or end-user, for example a
      person or other software.
    meaning: edam:data_0960
    title: User metadata
  edam:data_0962:
    text: edam:data_0962
    description: A human-readable collection of information about a specific chemical
      compound.
    meaning: edam:data_0962
    title: Small molecule report
  edam:data_0963:
    text: edam:data_0963
    description: A human-readable collection of information about a particular strain
      of organism cell line including plants, virus, fungi and bacteria. The data
      typically includes strain number, organism type, growth conditions, source and
      so on.
    meaning: edam:data_0963
    title: Cell line report
  edam:data_0966:
    text: edam:data_0966
    description: A term (name) from an ontology.
    meaning: edam:data_0966
    title: Ontology term
  edam:data_0967:
    text: edam:data_0967
    description: Data concerning or derived from a concept from a biological ontology.
    meaning: edam:data_0967
    title: Ontology concept data
  edam:data_0968:
    text: edam:data_0968
    description: 'Boolean operators (AND, OR and NOT) and wildcard characters may
      be allowed.

      Keyword(s) or phrase(s) used (typically) for text-searching purposes.'
    meaning: edam:data_0968
    title: Keyword
  edam:data_0970:
    text: edam:data_0970
    description: 'A bibliographic reference might include information such as authors,
      title, journal name, date and (possibly) a link to the abstract or full-text
      of the article if available.

      Bibliographic data that uniquely identifies a scientific article, book or other
      published material.'
    meaning: edam:data_0970
    title: Citation
  edam:data_0971:
    text: edam:data_0971
    description: A scientific text, typically a full text article from a scientific
      journal.
    meaning: edam:data_0971
    title: Article
  edam:data_0972:
    text: edam:data_0972
    description: 'A human-readable collection of information resulting from text mining.

      A text mining abstract will typically include an annotated a list of words or
      sentences extracted from one or more scientific articles.'
    meaning: edam:data_0972
    title: Text mining report
  edam:data_0976:
    text: edam:data_0976
    description: 'An identifier that identifies a particular type of data.

      This concept exists only to assist EDAM maintenance and navigation in graphical
      browsers. It does not add semantic information. This branch provides an alternative
      organisation of the concepts nested under ''Accession'' and ''Name''. All concepts
      under here are already included under ''Accession'' or ''Name''.'
    meaning: edam:data_0976
    title: Identifier (by type of entity)
  edam:data_0977:
    text: edam:data_0977
    description: An identifier of a bioinformatics tool, e.g. an application or web
      service.
    meaning: edam:data_0977
    title: Tool identifier
  edam:data_0982:
    text: edam:data_0982
    description: Name or other identifier of a molecule.
    meaning: edam:data_0982
    title: Molecule identifier
  edam:data_0983:
    text: edam:data_0983
    description: Identifier (e.g. character symbol) of a specific atom.
    meaning: edam:data_0983
    title: Atom ID
  edam:data_0984:
    text: edam:data_0984
    description: Name of a specific molecule.
    meaning: edam:data_0984
    title: Molecule name
  edam:data_0987:
    text: edam:data_0987
    description: Name of a chromosome.
    meaning: edam:data_0987
    title: Chromosome name
  edam:data_0988:
    text: edam:data_0988
    description: Identifier of a peptide chain.
    meaning: edam:data_0988
    title: Peptide identifier
  edam:data_0989:
    text: edam:data_0989
    description: Identifier of a protein.
    meaning: edam:data_0989
    title: Protein identifier
  edam:data_0990:
    text: edam:data_0990
    description: Unique name of a chemical compound.
    meaning: edam:data_0990
    title: Compound name
  edam:data_0991:
    text: edam:data_0991
    description: Unique registry number of a chemical compound.
    meaning: edam:data_0991
    title: Chemical registry number
  edam:data_0993:
    text: edam:data_0993
    description: Identifier of a drug.
    meaning: edam:data_0993
    title: Drug identifier
  edam:data_0994:
    text: edam:data_0994
    description: Identifier of an amino acid.
    meaning: edam:data_0994
    title: Amino acid identifier
  edam:data_0995:
    text: edam:data_0995
    description: Name or other identifier of a nucleotide.
    meaning: edam:data_0995
    title: Nucleotide identifier
  edam:data_0996:
    text: edam:data_0996
    description: Identifier of a monosaccharide.
    meaning: edam:data_0996
    title: Monosaccharide identifier
  edam:data_0997:
    text: edam:data_0997
    description: 'This is the recommended chemical name for use for example in database
      annotation.

      Unique name from Chemical Entities of Biological Interest (ChEBI) of a chemical
      compound.'
    meaning: edam:data_0997
    title: Chemical name (ChEBI)
  edam:data_0998:
    text: edam:data_0998
    description: IUPAC recommended name of a chemical compound.
    meaning: edam:data_0998
    title: Chemical name (IUPAC)
  edam:data_0999:
    text: edam:data_0999
    description: International Non-proprietary Name (INN or 'generic name') of a chemical
      compound, assigned by the World Health Organisation (WHO).
    meaning: edam:data_0999
    title: Chemical name (INN)
  edam:data_1000:
    text: edam:data_1000
    description: Brand name of a chemical compound.
    meaning: edam:data_1000
    title: Chemical name (brand)
  edam:data_1001:
    text: edam:data_1001
    description: Synonymous name of a chemical compound.
    meaning: edam:data_1001
    title: Chemical name (synonymous)
  edam:data_1002:
    text: edam:data_1002
    description: CAS registry number of a chemical compound; a unique numerical identifier
      of chemicals in the scientific literature, as assigned by the Chemical Abstracts
      Service.
    meaning: edam:data_1002
    title: CAS number
  edam:data_1003:
    text: edam:data_1003
    description: Beilstein registry number of a chemical compound.
    meaning: edam:data_1003
    title: Chemical registry number (Beilstein)
  edam:data_1004:
    text: edam:data_1004
    description: Gmelin registry number of a chemical compound.
    meaning: edam:data_1004
    title: Chemical registry number (Gmelin)
  edam:data_1005:
    text: edam:data_1005
    description: 3-letter code word for a ligand (HET group) from a PDB file, for
      example ATP.
    meaning: edam:data_1005
    title: HET group name
  edam:data_1006:
    text: edam:data_1006
    description: String of one or more ASCII characters representing an amino acid.
    meaning: edam:data_1006
    title: Amino acid name
  edam:data_1007:
    text: edam:data_1007
    description: String of one or more ASCII characters representing a nucleotide.
    meaning: edam:data_1007
    title: Nucleotide code
  edam:data_1008:
    text: edam:data_1008
    description: 'Identifier of a polypeptide chain from a protein.

      This is typically a character (for the chain) appended to a PDB identifier,
      e.g. 1cukA'
    meaning: edam:data_1008
    title: Polypeptide chain ID
  edam:data_1009:
    text: edam:data_1009
    description: Name of a protein.
    meaning: edam:data_1009
    title: Protein name
  edam:data_1010:
    text: edam:data_1010
    description: Name or other identifier of an enzyme or record from a database of
      enzymes.
    meaning: edam:data_1010
    title: Enzyme identifier
  edam:data_1011:
    text: edam:data_1011
    description: An Enzyme Commission (EC) number of an enzyme.
    meaning: edam:data_1011
    title: EC number
  edam:data_1012:
    text: edam:data_1012
    description: Name of an enzyme.
    meaning: edam:data_1012
    title: Enzyme name
  edam:data_1013:
    text: edam:data_1013
    description: Name of a restriction enzyme.
    meaning: edam:data_1013
    title: Restriction enzyme name
  edam:data_1015:
    text: edam:data_1015
    description: A unique identifier of molecular sequence feature, for example an
      ID of a feature that is unique within the scope of the GFF file.
    meaning: edam:data_1015
    title: Sequence feature ID
  edam:data_1016:
    text: edam:data_1016
    description: A position of one or more points (base or residue) in a sequence,
      or part of such a specification.
    meaning: edam:data_1016
    title: Sequence position
  edam:data_1017:
    text: edam:data_1017
    description: Specification of range(s) of sequence positions.
    meaning: edam:data_1017
    title: Sequence range
  edam:data_1020:
    text: edam:data_1020
    description: 'A feature key indicates the biological nature of the feature or
      information about changes to or versions of the sequence.

      The type of a sequence feature, typically a term or accession from the Sequence
      Ontology, for example an EMBL or Swiss-Prot sequence feature key.'
    meaning: edam:data_1020
    title: Sequence feature key
  edam:data_1021:
    text: edam:data_1021
    description: 'Feature qualifiers hold information about a feature beyond that
      provided by the feature key and location.

      Typically one of the EMBL or Swiss-Prot feature qualifiers.'
    meaning: edam:data_1021
    title: Sequence feature qualifier
  edam:data_1022:
    text: edam:data_1022
    description: 'A feature label identifies a feature of a sequence database entry.
      When used with the database name and the entry''s primary accession number,
      it is a unique identifier of that feature.

      A name of a sequence feature, e.g. the name of a feature to be displayed to
      an end-user. Typically an EMBL or Swiss-Prot feature label.'
    meaning: edam:data_1022
    title: Sequence feature label
  edam:data_1023:
    text: edam:data_1023
    description: The name of a sequence feature-containing entity adhering to the
      standard feature naming scheme used by all EMBOSS applications.
    meaning: edam:data_1023
    title: EMBOSS Uniform Feature Object
  edam:data_1025:
    text: edam:data_1025
    description: An identifier of a gene, such as a name/symbol or a unique identifier
      of a gene in a database.
    meaning: edam:data_1025
    title: Gene identifier
  edam:data_1026:
    text: edam:data_1026
    description: The short name of a gene; a single word that does not contain white
      space characters. It is typically derived from the gene name.
    meaning: edam:data_1026
    title: Gene symbol
  edam:data_1027:
    text: edam:data_1027
    description: An NCBI unique identifier of a gene.
    meaning: edam:data_1027
    title: Gene ID (NCBI)
  edam:data_1031:
    text: edam:data_1031
    description: Identifier of a gene or feature from the CGD database.
    meaning: edam:data_1031
    title: Gene ID (CGD)
  edam:data_1032:
    text: edam:data_1032
    description: Identifier of a gene from DictyBase.
    meaning: edam:data_1032
    title: Gene ID (DictyBase)
  edam:data_1033:
    text: edam:data_1033
    description: Unique identifier for a gene (or other feature) from the Ensembl
      database.
    meaning: edam:data_1033
    title: Ensembl gene ID
  edam:data_1034:
    text: edam:data_1034
    description: Identifier of an entry from the SGD database.
    meaning: edam:data_1034
    title: Gene ID (SGD)
  edam:data_1035:
    text: edam:data_1035
    description: Identifier of a gene from the GeneDB database.
    meaning: edam:data_1035
    title: Gene ID (GeneDB)
  edam:data_1036:
    text: edam:data_1036
    description: Identifier of an entry from the TIGR database.
    meaning: edam:data_1036
    title: TIGR identifier
  edam:data_1037:
    text: edam:data_1037
    description: Identifier of an gene from the TAIR database.
    meaning: edam:data_1037
    title: TAIR accession (gene)
  edam:data_1038:
    text: edam:data_1038
    description: 'Identifier of a protein structural domain.

      This is typically a character or string concatenated with a PDB identifier and
      a chain identifier.'
    meaning: edam:data_1038
    title: Protein domain ID
  edam:data_1039:
    text: edam:data_1039
    description: Identifier of a protein domain (or other node) from the SCOP database.
    meaning: edam:data_1039
    title: SCOP domain identifier
  edam:data_1040:
    text: edam:data_1040
    description: Identifier of a protein domain from CATH.
    meaning: edam:data_1040
    title: CATH domain ID
  edam:data_1041:
    text: edam:data_1041
    description: 'A SCOP concise classification string (sccs) is a compact representation
      of a SCOP domain classification.

      An scss includes the class (alphabetical), fold, superfamily and family (all
      numerical) to which a given domain belongs.'
    meaning: edam:data_1041
    title: SCOP concise classification string (sccs)
  edam:data_1042:
    text: edam:data_1042
    description: 'A sunid uniquely identifies an entry in the SCOP hierarchy, including
      leaves (the SCOP domains) and higher level nodes including entries corresponding
      to the protein level.

      Unique identifier (number) of an entry in the SCOP hierarchy, for example 33229.'
    meaning: edam:data_1042
    title: SCOP sunid
  edam:data_1043:
    text: edam:data_1043
    description: A code number identifying a node from the CATH database.
    meaning: edam:data_1043
    title: CATH node ID
  edam:data_1044:
    text: edam:data_1044
    description: The name of a biological kingdom (Bacteria, Archaea, or Eukaryotes).
    meaning: edam:data_1044
    title: Kingdom name
  edam:data_1045:
    text: edam:data_1045
    description: The name of a species (typically a taxonomic group) of organism.
    meaning: edam:data_1045
    title: Species name
  edam:data_1046:
    text: edam:data_1046
    description: The name of a strain of an organism variant, typically a plant, virus
      or bacterium.
    meaning: edam:data_1046
    title: Strain name
  edam:data_1047:
    text: edam:data_1047
    description: A string of characters that name or otherwise identify a resource
      on the Internet.
    meaning: edam:data_1047
    title: URI
  edam:data_1048:
    text: edam:data_1048
    description: An identifier of a biological or bioinformatics database.
    meaning: edam:data_1048
    title: Database ID
  edam:data_1049:
    text: edam:data_1049
    description: The name of a directory.
    meaning: edam:data_1049
    title: Directory name
  edam:data_1050:
    text: edam:data_1050
    description: The name (or part of a name) of a file (of any type).
    meaning: edam:data_1050
    title: File name
  edam:data_1051:
    text: edam:data_1051
    description: Name of an ontology of biological or bioinformatics concepts and
      relations.
    meaning: edam:data_1051
    title: Ontology name
  edam:data_1052:
    text: edam:data_1052
    description: A Uniform Resource Locator (URL).
    meaning: edam:data_1052
    title: URL
  edam:data_1053:
    text: edam:data_1053
    description: A Uniform Resource Name (URN).
    meaning: edam:data_1053
    title: URN
  edam:data_1055:
    text: edam:data_1055
    description: 'A Life Science Identifier (LSID) - a unique identifier of some data.

      LSIDs provide a standard way to locate and describe data. An LSID is represented
      as a Uniform Resource Name (URN) with the following format: URN:LSID:<Authority>:<Namespace>:<ObjectID>[:<Version>]'
    meaning: edam:data_1055
    title: LSID
  edam:data_1056:
    text: edam:data_1056
    description: The name of a biological or bioinformatics database.
    meaning: edam:data_1056
    title: Database name
  edam:data_1058:
    text: edam:data_1058
    description: The name of a file (of any type) with restricted possible values.
    meaning: edam:data_1058
    title: Enumerated file name
  edam:data_1059:
    text: edam:data_1059
    description: 'A file extension is the characters appearing after the final ''.''
      in the file name.

      The extension of a file name.'
    meaning: edam:data_1059
    title: File name extension
  edam:data_1060:
    text: edam:data_1060
    description: 'A file base name is the file name stripped of its directory specification
      and extension.

      The base name of a file.'
    meaning: edam:data_1060
    title: File base name
  edam:data_1061:
    text: edam:data_1061
    description: Name of a QSAR descriptor.
    meaning: edam:data_1061
    title: QSAR descriptor name
  edam:data_1063:
    text: edam:data_1063
    description: An identifier of molecular sequence(s) or entries from a molecular
      sequence database.
    meaning: edam:data_1063
    title: Sequence identifier
  edam:data_1064:
    text: edam:data_1064
    description: An identifier of a set of molecular sequence(s).
    meaning: edam:data_1064
    title: Sequence set ID
  edam:data_1066:
    text: edam:data_1066
    description: Identifier of a molecular sequence alignment, for example a record
      from an alignment database.
    meaning: edam:data_1066
    title: Sequence alignment ID
  edam:data_1068:
    text: edam:data_1068
    description: Identifier of a phylogenetic tree for example from a phylogenetic
      tree database.
    meaning: edam:data_1068
    title: Phylogenetic tree ID
  edam:data_1069:
    text: edam:data_1069
    description: An identifier of a comparison matrix.
    meaning: edam:data_1069
    title: Comparison matrix identifier
  edam:data_1070:
    text: edam:data_1070
    description: A unique and persistent identifier of a molecular tertiary structure,
      typically an entry from a structure database.
    meaning: edam:data_1070
    title: Structure ID
  edam:data_1071:
    text: edam:data_1071
    description: Identifier or name of a structural (3D) profile or template (representing
      a structure or structure alignment).
    meaning: edam:data_1071
    title: Structural (3D) profile ID
  edam:data_1072:
    text: edam:data_1072
    description: Identifier of an entry from a database of tertiary structure alignments.
    meaning: edam:data_1072
    title: Structure alignment ID
  edam:data_1073:
    text: edam:data_1073
    description: Identifier of an index of amino acid physicochemical and biochemical
      property data.
    meaning: edam:data_1073
    title: Amino acid index ID
  edam:data_1074:
    text: edam:data_1074
    description: Identifier of a report of protein interactions from a protein interaction
      database (typically).
    meaning: edam:data_1074
    title: Protein interaction ID
  edam:data_1075:
    text: edam:data_1075
    description: Identifier of a protein family.
    meaning: edam:data_1075
    title: Protein family identifier
  edam:data_1076:
    text: edam:data_1076
    description: Unique name of a codon usage table.
    meaning: edam:data_1076
    title: Codon usage table name
  edam:data_1077:
    text: edam:data_1077
    description: Identifier of a transcription factor (or a TF binding site).
    meaning: edam:data_1077
    title: Transcription factor identifier
  edam:data_1078:
    text: edam:data_1078
    description: Identifier of an entry from a database of microarray data.
    meaning: edam:data_1078
    title: Experiment annotation ID
  edam:data_1079:
    text: edam:data_1079
    description: Identifier of an entry from a database of electron microscopy data.
    meaning: edam:data_1079
    title: Electron microscopy model ID
  edam:data_1080:
    text: edam:data_1080
    description: Accession of a report of gene expression (e.g. a gene expression
      profile) from a database.
    meaning: edam:data_1080
    title: Gene expression report ID
  edam:data_1081:
    text: edam:data_1081
    description: Identifier of an entry from a database of genotypes and phenotypes.
    meaning: edam:data_1081
    title: Genotype and phenotype annotation ID
  edam:data_1082:
    text: edam:data_1082
    description: Identifier of an entry from a database of biological pathways or
      networks.
    meaning: edam:data_1082
    title: Pathway or network identifier
  edam:data_1083:
    text: edam:data_1083
    description: Identifier of a biological or biomedical workflow, typically from
      a database of workflows.
    meaning: edam:data_1083
    title: Workflow ID
  edam:data_1084:
    text: edam:data_1084
    description: Identifier of a data type definition from some provider.
    meaning: edam:data_1084
    title: Data resource definition ID
  edam:data_1085:
    text: edam:data_1085
    description: Identifier of a mathematical model, typically an entry from a database.
    meaning: edam:data_1085
    title: Biological model ID
  edam:data_1086:
    text: edam:data_1086
    description: Identifier of an entry from a database of chemicals.
    meaning: edam:data_1086
    title: Compound identifier
  edam:data_1087:
    text: edam:data_1087
    description: A unique (typically numerical) identifier of a concept in an ontology
      of biological or bioinformatics concepts and relations.
    meaning: edam:data_1087
    title: Ontology concept ID
  edam:data_1088:
    text: edam:data_1088
    description: Unique identifier of a scientific article.
    meaning: edam:data_1088
    title: Article ID
  edam:data_1089:
    text: edam:data_1089
    description: Identifier of an object from the FlyBase database.
    meaning: edam:data_1089
    title: FlyBase ID
  edam:data_1091:
    text: edam:data_1091
    description: Name of an object from the WormBase database, usually a human-readable
      name.
    meaning: edam:data_1091
    title: WormBase name
  edam:data_1092:
    text: edam:data_1092
    description: 'A WormBase class describes the type of object such as ''sequence''
      or ''protein''.

      Class of an object from the WormBase database.'
    meaning: edam:data_1092
    title: WormBase class
  edam:data_1093:
    text: edam:data_1093
    description: A persistent, unique identifier of a molecular sequence database
      entry.
    meaning: edam:data_1093
    title: Sequence accession
  edam:data_1095:
    text: edam:data_1095
    description: The name of a sequence-based entity adhering to the standard sequence
      naming scheme used by all EMBOSS applications.
    meaning: edam:data_1095
    title: EMBOSS Uniform Sequence Address
  edam:data_1096:
    text: edam:data_1096
    description: Accession number of a protein sequence database entry.
    meaning: edam:data_1096
    title: Sequence accession (protein)
  edam:data_1097:
    text: edam:data_1097
    description: Accession number of a nucleotide sequence database entry.
    meaning: edam:data_1097
    title: Sequence accession (nucleic acid)
  edam:data_1098:
    text: edam:data_1098
    description: Accession number of a RefSeq database entry.
    meaning: edam:data_1098
    title: RefSeq accession
  edam:data_1100:
    text: edam:data_1100
    description: An identifier of PIR sequence database entry.
    meaning: edam:data_1100
    title: PIR identifier
  edam:data_1102:
    text: edam:data_1102
    description: Primary identifier of a Gramene database entry.
    meaning: edam:data_1102
    title: Gramene primary identifier
  edam:data_1103:
    text: edam:data_1103
    description: Identifier of a (nucleic acid) entry from the EMBL/GenBank/DDBJ databases.
    meaning: edam:data_1103
    title: EMBL/GenBank/DDBJ ID
  edam:data_1104:
    text: edam:data_1104
    description: A unique identifier of an entry (gene cluster) from the NCBI UniGene
      database.
    meaning: edam:data_1104
    title: Sequence cluster ID (UniGene)
  edam:data_1105:
    text: edam:data_1105
    description: Identifier of a dbEST database entry.
    meaning: edam:data_1105
    title: dbEST accession
  edam:data_1106:
    text: edam:data_1106
    description: Identifier of a dbSNP database entry.
    meaning: edam:data_1106
    title: dbSNP ID
  edam:data_1112:
    text: edam:data_1112
    description: An identifier of a cluster of molecular sequence(s).
    meaning: edam:data_1112
    title: Sequence cluster ID
  edam:data_1113:
    text: edam:data_1113
    description: Unique identifier of an entry from the COG database.
    meaning: edam:data_1113
    title: Sequence cluster ID (COG)
  edam:data_1114:
    text: edam:data_1114
    description: Identifier of a sequence motif, for example an entry from a motif
      database.
    meaning: edam:data_1114
    title: Sequence motif identifier
  edam:data_1115:
    text: edam:data_1115
    description: 'A sequence profile typically represents a sequence alignment.

      Identifier of a sequence profile.'
    meaning: edam:data_1115
    title: Sequence profile ID
  edam:data_1116:
    text: edam:data_1116
    description: Identifier of an entry from the ELMdb database of protein functional
      sites.
    meaning: edam:data_1116
    title: ELM ID
  edam:data_1117:
    text: edam:data_1117
    description: Accession number of an entry from the Prosite database.
    meaning: edam:data_1117
    title: Prosite accession number
  edam:data_1118:
    text: edam:data_1118
    description: Unique identifier or name of a HMMER hidden Markov model.
    meaning: edam:data_1118
    title: HMMER hidden Markov model ID
  edam:data_1119:
    text: edam:data_1119
    description: Unique identifier or name of a profile from the JASPAR database.
    meaning: edam:data_1119
    title: JASPAR profile ID
  edam:data_1123:
    text: edam:data_1123
    description: Accession number of an entry from the TreeBASE database.
    meaning: edam:data_1123
    title: TreeBASE study accession number
  edam:data_1124:
    text: edam:data_1124
    description: Accession number of an entry from the TreeFam database.
    meaning: edam:data_1124
    title: TreeFam accession number
  edam:data_1126:
    text: edam:data_1126
    description: 'See for example http://www.ebi.ac.uk/Tools/webservices/help/matrix.

      Unique name or identifier of a comparison matrix.'
    meaning: edam:data_1126
    title: Comparison matrix name
  edam:data_1127:
    text: edam:data_1127
    description: 'A PDB identification code which consists of 4 characters, the first
      of which is a digit in the range 0 - 9; the remaining 3 are alphanumeric, and
      letters are upper case only. (source: https://cdn.rcsb.org/wwpdb/docs/documentation/file-format/PDB_format_1996.pdf)

      An identifier of an entry from the PDB database.'
    meaning: edam:data_1127
    title: PDB ID
  edam:data_1128:
    text: edam:data_1128
    description: Identifier of an entry from the AAindex database.
    meaning: edam:data_1128
    title: AAindex ID
  edam:data_1129:
    text: edam:data_1129
    description: Accession number of an entry from the BIND database.
    meaning: edam:data_1129
    title: BIND accession number
  edam:data_1130:
    text: edam:data_1130
    description: Accession number of an entry from the IntAct database.
    meaning: edam:data_1130
    title: IntAct accession number
  edam:data_1131:
    text: edam:data_1131
    description: Name of a protein family.
    meaning: edam:data_1131
    title: Protein family name
  edam:data_1132:
    text: edam:data_1132
    description: Name of an InterPro entry, usually indicating the type of protein
      matches for that entry.
    meaning: edam:data_1132
    title: InterPro entry name
  edam:data_1133:
    text: edam:data_1133
    description: 'Every InterPro entry has a unique accession number to provide a
      persistent citation of database records.

      Primary accession number of an InterPro entry.'
    meaning: edam:data_1133
    title: InterPro accession
  edam:data_1134:
    text: edam:data_1134
    description: Secondary accession number of an InterPro entry.
    meaning: edam:data_1134
    title: InterPro secondary accession
  edam:data_1135:
    text: edam:data_1135
    description: Unique identifier of an entry from the Gene3D database.
    meaning: edam:data_1135
    title: Gene3D ID
  edam:data_1136:
    text: edam:data_1136
    description: Unique identifier of an entry from the PIRSF database.
    meaning: edam:data_1136
    title: PIRSF ID
  edam:data_1137:
    text: edam:data_1137
    description: The unique identifier of an entry in the PRINTS database.
    meaning: edam:data_1137
    title: PRINTS code
  edam:data_1138:
    text: edam:data_1138
    description: Accession number of a Pfam entry.
    meaning: edam:data_1138
    title: Pfam accession number
  edam:data_1139:
    text: edam:data_1139
    description: Accession number of an entry from the SMART database.
    meaning: edam:data_1139
    title: SMART accession number
  edam:data_1140:
    text: edam:data_1140
    description: Unique identifier (number) of a hidden Markov model from the Superfamily
      database.
    meaning: edam:data_1140
    title: Superfamily hidden Markov model number
  edam:data_1141:
    text: edam:data_1141
    description: Accession number of an entry (family) from the TIGRFam database.
    meaning: edam:data_1141
    title: TIGRFam ID
  edam:data_1142:
    text: edam:data_1142
    description: 'A ProDom domain family accession number.

      ProDom is a protein domain family database.'
    meaning: edam:data_1142
    title: ProDom accession number
  edam:data_1143:
    text: edam:data_1143
    description: Identifier of an entry from the TRANSFAC database.
    meaning: edam:data_1143
    title: TRANSFAC accession number
  edam:data_1144:
    text: edam:data_1144
    description: Accession number of an entry from the ArrayExpress database.
    meaning: edam:data_1144
    title: ArrayExpress accession number
  edam:data_1145:
    text: edam:data_1145
    description: PRIDE experiment accession number.
    meaning: edam:data_1145
    title: PRIDE experiment accession number
  edam:data_1146:
    text: edam:data_1146
    description: Identifier of an entry from the EMDB electron microscopy database.
    meaning: edam:data_1146
    title: EMDB ID
  edam:data_1147:
    text: edam:data_1147
    description: Accession number of an entry from the GEO database.
    meaning: edam:data_1147
    title: GEO accession number
  edam:data_1148:
    text: edam:data_1148
    description: Identifier of an entry from the GermOnline database.
    meaning: edam:data_1148
    title: GermOnline ID
  edam:data_1149:
    text: edam:data_1149
    description: Identifier of an entry from the EMAGE database.
    meaning: edam:data_1149
    title: EMAGE ID
  edam:data_1150:
    text: edam:data_1150
    description: Accession number of an entry from a database of disease.
    meaning: edam:data_1150
    title: Disease ID
  edam:data_1151:
    text: edam:data_1151
    description: Identifier of an entry from the HGVbase database.
    meaning: edam:data_1151
    title: HGVbase ID
  edam:data_1153:
    text: edam:data_1153
    description: Identifier of an entry from the OMIM database.
    meaning: edam:data_1153
    title: OMIM ID
  edam:data_1154:
    text: edam:data_1154
    description: Unique identifier of an object from one of the KEGG databases (excluding
      the GENES division).
    meaning: edam:data_1154
    title: KEGG object identifier
  edam:data_1155:
    text: edam:data_1155
    description: Identifier of an entry from the Reactome database.
    meaning: edam:data_1155
    title: Pathway ID (reactome)
  edam:data_1157:
    text: edam:data_1157
    description: Identifier of an pathway from the BioCyc biological pathways database.
    meaning: edam:data_1157
    title: Pathway ID (BioCyc)
  edam:data_1158:
    text: edam:data_1158
    description: Identifier of an entry from the INOH database.
    meaning: edam:data_1158
    title: Pathway ID (INOH)
  edam:data_1159:
    text: edam:data_1159
    description: Identifier of an entry from the PATIKA database.
    meaning: edam:data_1159
    title: Pathway ID (PATIKA)
  edam:data_1160:
    text: edam:data_1160
    description: 'Identifier of an entry from the CPDB (ConsensusPathDB) biological
      pathways database, which is an identifier from an external database integrated
      into CPDB.

      This concept refers to identifiers used by the databases collated in CPDB; CPDB
      identifiers are not independently defined.'
    meaning: edam:data_1160
    title: Pathway ID (CPDB)
  edam:data_1161:
    text: edam:data_1161
    description: Identifier of a biological pathway from the Panther Pathways database.
    meaning: edam:data_1161
    title: Pathway ID (Panther)
  edam:data_1162:
    text: edam:data_1162
    description: 'This is the identifier used internally by MIRIAM for a data type.

      Unique identifier of a MIRIAM data resource.'
    meaning: edam:data_1162
    title: MIRIAM identifier
  edam:data_1163:
    text: edam:data_1163
    description: The name of a data type from the MIRIAM database.
    meaning: edam:data_1163
    title: MIRIAM data type name
  edam:data_1164:
    text: edam:data_1164
    description: 'A MIRIAM URI consists of the URI of the MIRIAM data type (PubMed,
      UniProt etc) followed by the identifier of an element of that data type, for
      example PMID for a publication or an accession number for a GO term.

      The URI (URL or URN) of a data entity from the MIRIAM database.'
    meaning: edam:data_1164
    title: MIRIAM URI
  edam:data_1165:
    text: edam:data_1165
    description: 'The primary name of a MIRIAM data type is taken from a controlled
      vocabulary.

      The primary name of a data type from the MIRIAM database.'
    meaning: edam:data_1165
    title: MIRIAM data type primary name
  edam:data_1166:
    text: edam:data_1166
    description: 'A synonymous name for a MIRIAM data type taken from a controlled
      vocabulary.

      A synonymous name of a data type from the MIRIAM database.'
    meaning: edam:data_1166
    title: MIRIAM data type synonymous name
  edam:data_1167:
    text: edam:data_1167
    description: Unique identifier of a Taverna workflow.
    meaning: edam:data_1167
    title: Taverna workflow ID
  edam:data_1170:
    text: edam:data_1170
    description: Name of a biological (mathematical) model.
    meaning: edam:data_1170
    title: Biological model name
  edam:data_1171:
    text: edam:data_1171
    description: Unique identifier of an entry from the BioModel database.
    meaning: edam:data_1171
    title: BioModel ID
  edam:data_1172:
    text: edam:data_1172
    description: Chemical structure specified in PubChem Compound Identification (CID),
      a non-zero integer identifier for a unique chemical structure.
    meaning: edam:data_1172
    title: PubChem CID
  edam:data_1173:
    text: edam:data_1173
    description: Identifier of an entry from the ChemSpider database.
    meaning: edam:data_1173
    title: ChemSpider ID
  edam:data_1174:
    text: edam:data_1174
    description: Identifier of an entry from the ChEBI database.
    meaning: edam:data_1174
    title: ChEBI ID
  edam:data_1175:
    text: edam:data_1175
    description: An identifier of a concept from the BioPax ontology.
    meaning: edam:data_1175
    title: BioPax concept ID
  edam:data_1176:
    text: edam:data_1176
    description: An identifier of a concept from The Gene Ontology.
    meaning: edam:data_1176
    title: GO concept ID
  edam:data_1177:
    text: edam:data_1177
    description: An identifier of a concept from the MeSH vocabulary.
    meaning: edam:data_1177
    title: MeSH concept ID
  edam:data_1178:
    text: edam:data_1178
    description: An identifier of a concept from the HGNC controlled vocabulary.
    meaning: edam:data_1178
    title: HGNC concept ID
  edam:data_1179:
    text: edam:data_1179
    description: A stable unique identifier for each taxon (for a species, a family,
      an order, or any other group in the NCBI taxonomy database.
    meaning: edam:data_1179
    title: NCBI taxonomy ID
  edam:data_1180:
    text: edam:data_1180
    description: An identifier of a concept from the Plant Ontology (PO).
    meaning: edam:data_1180
    title: Plant Ontology concept ID
  edam:data_1181:
    text: edam:data_1181
    description: An identifier of a concept from the UMLS vocabulary.
    meaning: edam:data_1181
    title: UMLS concept ID
  edam:data_1182:
    text: edam:data_1182
    description: 'An identifier of a concept from Foundational Model of Anatomy.

      Classifies anatomical entities according to their shared characteristics (genus)
      and distinguishing characteristics (differentia). Specifies the part-whole and
      spatial relationships of the entities, morphological transformation of the entities
      during prenatal development and the postnatal life cycle and principles, rules
      and definitions according to which classes and relationships in the other three
      components of FMA are represented.'
    meaning: edam:data_1182
    title: FMA concept ID
  edam:data_1183:
    text: edam:data_1183
    description: An identifier of a concept from the EMAP mouse ontology.
    meaning: edam:data_1183
    title: EMAP concept ID
  edam:data_1184:
    text: edam:data_1184
    description: An identifier of a concept from the ChEBI ontology.
    meaning: edam:data_1184
    title: ChEBI concept ID
  edam:data_1185:
    text: edam:data_1185
    description: An identifier of a concept from the MGED ontology.
    meaning: edam:data_1185
    title: MGED concept ID
  edam:data_1186:
    text: edam:data_1186
    description: 'An identifier of a concept from the myGrid ontology.

      The ontology is provided as two components, the service ontology and the domain
      ontology. The domain ontology acts provides concepts for core bioinformatics
      data types and their relations. The service ontology describes the physical
      and operational features of web services.'
    meaning: edam:data_1186
    title: myGrid concept ID
  edam:data_1187:
    text: edam:data_1187
    description: PubMed unique identifier of an article.
    meaning: edam:data_1187
    title: PubMed ID
  edam:data_1188:
    text: edam:data_1188
    description: Digital Object Identifier (DOI) of a published article.
    meaning: edam:data_1188
    title: DOI
  edam:data_1189:
    text: edam:data_1189
    description: 'Medline UI (unique identifier) of an article.

      The use of Medline UI has been replaced by the PubMed unique identifier.'
    meaning: edam:data_1189
    title: Medline UI
  edam:data_1190:
    text: edam:data_1190
    description: The name of a computer package, application, method or function.
    meaning: edam:data_1190
    title: Tool name
  edam:data_1191:
    text: edam:data_1191
    description: 'Signature methods from http://www.ebi.ac.uk/Tools/InterProScan/help.html#results
      include BlastProDom, FPrintScan, HMMPIR, HMMPfam, HMMSmart, HMMTigr, ProfileScan,
      ScanRegExp, SuperFamily and HAMAP.

      The unique name of a signature (sequence classifier) method.'
    meaning: edam:data_1191
    title: Tool name (signature)
  edam:data_1192:
    text: edam:data_1192
    description: 'The name of a BLAST tool.

      This include ''blastn'', ''blastp'', ''blastx'', ''tblastn'' and ''tblastx''.'
    meaning: edam:data_1192
    title: Tool name (BLAST)
  edam:data_1193:
    text: edam:data_1193
    description: 'The name of a FASTA tool.

      This includes ''fasta3'', ''fastx3'', ''fasty3'', ''fastf3'', ''fasts3'' and
      ''ssearch''.'
    meaning: edam:data_1193
    title: Tool name (FASTA)
  edam:data_1194:
    text: edam:data_1194
    description: The name of an EMBOSS application.
    meaning: edam:data_1194
    title: Tool name (EMBOSS)
  edam:data_1195:
    text: edam:data_1195
    description: The name of an EMBASSY package.
    meaning: edam:data_1195
    title: Tool name (EMBASSY package)
  edam:data_1201:
    text: edam:data_1201
    description: A QSAR constitutional descriptor.
    meaning: edam:data_1201
    title: QSAR descriptor (constitutional)
  edam:data_1202:
    text: edam:data_1202
    description: A QSAR electronic descriptor.
    meaning: edam:data_1202
    title: QSAR descriptor (electronic)
  edam:data_1203:
    text: edam:data_1203
    description: A QSAR geometrical descriptor.
    meaning: edam:data_1203
    title: QSAR descriptor (geometrical)
  edam:data_1204:
    text: edam:data_1204
    description: A QSAR topological descriptor.
    meaning: edam:data_1204
    title: QSAR descriptor (topological)
  edam:data_1205:
    text: edam:data_1205
    description: A QSAR molecular descriptor.
    meaning: edam:data_1205
    title: QSAR descriptor (molecular)
  edam:data_1233:
    text: edam:data_1233
    description: Any collection of multiple protein sequences and associated metadata
      that do not (typically) correspond to common sequence database records or database
      entries.
    meaning: edam:data_1233
    title: Sequence set (protein)
  edam:data_1234:
    text: edam:data_1234
    description: Any collection of multiple nucleotide sequences and associated metadata
      that do not (typically) correspond to common sequence database records or database
      entries.
    meaning: edam:data_1234
    title: Sequence set (nucleic acid)
  edam:data_1235:
    text: edam:data_1235
    description: 'A set of sequences that have been clustered or otherwise classified
      as belonging to a group including (typically) sequence cluster information.

      The cluster might include sequences identifiers, short descriptions, alignment
      and summary information.'
    meaning: edam:data_1235
    title: Sequence cluster
  edam:data_1238:
    text: edam:data_1238
    description: A protein sequence cleaved into peptide fragments (by enzymatic or
      chemical cleavage) with fragment masses.
    meaning: edam:data_1238
    title: Proteolytic digest
  edam:data_1239:
    text: edam:data_1239
    description: Restriction digest fragments from digesting a nucleotide sequence
      with restriction sites using a restriction endonuclease.
    meaning: edam:data_1239
    title: Restriction digest
  edam:data_1240:
    text: edam:data_1240
    description: Oligonucleotide primer(s) for PCR and DNA amplification, for example
      a minimal primer set.
    meaning: edam:data_1240
    title: PCR primers
  edam:data_1245:
    text: edam:data_1245
    description: 'A cluster of protein sequences.

      The sequences are typically related, for example a family of sequences.'
    meaning: edam:data_1245
    title: Sequence cluster (protein)
  edam:data_1246:
    text: edam:data_1246
    description: 'A cluster of nucleotide sequences.

      The sequences are typically related, for example a family of sequences.'
    meaning: edam:data_1246
    title: Sequence cluster (nucleic acid)
  edam:data_1249:
    text: edam:data_1249
    description: The size (length) of a sequence, subsequence or region in a sequence,
      or range(s) of lengths.
    meaning: edam:data_1249
    title: Sequence length
  edam:data_1254:
    text: edam:data_1254
    description: An informative report about non-positional sequence features, typically
      a report on general molecular sequence properties derived from sequence analysis.
    meaning: edam:data_1254
    title: Sequence property
  edam:data_1255:
    text: edam:data_1255
    description: 'Annotation of positional features of molecular sequence(s), i.e.
      that can be mapped to position(s) in the sequence.

      This includes annotation of positional sequence features, organised into a standard
      feature table, or any other report of sequence features. General feature reports
      are a source of sequence feature table information although internal conversion
      would be required.'
    meaning: edam:data_1255
    title: Sequence features
  edam:data_1259:
    text: edam:data_1259
    description: A report on sequence complexity, for example low-complexity or repeat
      regions in sequences.
    meaning: edam:data_1259
    title: Sequence complexity report
  edam:data_1260:
    text: edam:data_1260
    description: A report on ambiguity in molecular sequence(s).
    meaning: edam:data_1260
    title: Sequence ambiguity report
  edam:data_1261:
    text: edam:data_1261
    description: A report (typically a table) on character or word composition / frequency
      of a molecular sequence(s).
    meaning: edam:data_1261
    title: Sequence composition report
  edam:data_1262:
    text: edam:data_1262
    description: A report on peptide fragments of certain molecular weight(s) in one
      or more protein sequences.
    meaning: edam:data_1262
    title: Peptide molecular weight hits
  edam:data_1263:
    text: edam:data_1263
    description: A plot of third base position variability in a nucleotide sequence.
    meaning: edam:data_1263
    title: Base position variability plot
  edam:data_1265:
    text: edam:data_1265
    description: A table of base frequencies of a nucleotide sequence.
    meaning: edam:data_1265
    title: Base frequencies table
  edam:data_1266:
    text: edam:data_1266
    description: A table of word composition of a nucleotide sequence.
    meaning: edam:data_1266
    title: Base word frequencies table
  edam:data_1267:
    text: edam:data_1267
    description: A table of amino acid frequencies of a protein sequence.
    meaning: edam:data_1267
    title: Amino acid frequencies table
  edam:data_1268:
    text: edam:data_1268
    description: A table of amino acid word composition of a protein sequence.
    meaning: edam:data_1268
    title: Amino acid word frequencies table
  edam:data_1270:
    text: edam:data_1270
    description: Annotation of positional sequence features, organised into a standard
      feature table.
    meaning: edam:data_1270
    title: Feature table
  edam:data_1274:
    text: edam:data_1274
    description: A map of (typically one) DNA sequence annotated with positional or
      non-positional features.
    meaning: edam:data_1274
    title: Map
  edam:data_1276:
    text: edam:data_1276
    description: 'An informative report on intrinsic positional features of a nucleotide
      sequence, formatted to be machine-readable.

      This includes nucleotide sequence feature annotation in any known sequence feature
      table format and any other report of nucleic acid features.'
    meaning: edam:data_1276
    title: Nucleic acid features
  edam:data_1277:
    text: edam:data_1277
    description: 'An informative report on intrinsic positional features of a protein
      sequence.

      This includes protein sequence feature annotation in any known sequence feature
      table format and any other report of protein features.'
    meaning: edam:data_1277
    title: Protein features
  edam:data_1278:
    text: edam:data_1278
    description: 'A genetic (linkage) map indicates the proximity of two genes on
      a chromosome, whether two genes are linked and the frequency they are transmitted
      together to an offspring. They are limited to genetic markers of traits observable
      only in whole organisms.

      A map showing the relative positions of genetic markers in a nucleic acid sequence,
      based on estimation of non-physical distance such as recombination frequencies.'
    meaning: edam:data_1278
    title: Genetic map
  edam:data_1279:
    text: edam:data_1279
    description: 'A map of genetic markers in a contiguous, assembled genomic sequence,
      with the sizes and separation of markers measured in base pairs.

      A sequence map typically includes annotation on significant subsequences such
      as contigs, haplotypes and genes. The contigs shown will (typically) be a set
      of small overlapping clones representing a complete chromosomal segment.'
    meaning: edam:data_1279
    title: Sequence map
  edam:data_1280:
    text: edam:data_1280
    description: 'A map of DNA (linear or circular) annotated with physical features
      or landmarks such as restriction sites, cloned DNA fragments, genes or genetic
      markers, along with the physical distances between them.

      Distance in a physical map is measured in base pairs. A physical map might be
      ordered relative to a reference map (typically a genetic map) in the process
      of genome sequencing.'
    meaning: edam:data_1280
    title: Physical map
  edam:data_1283:
    text: edam:data_1283
    description: 'A map showing banding patterns derived from direct observation of
      a stained chromosome.

      This is the lowest-resolution physical map and can provide only rough estimates
      of physical (base pair) distances. Like a genetic map, they are limited to genetic
      markers of traits observable only in whole organisms.'
    meaning: edam:data_1283
    title: Cytogenetic map
  edam:data_1284:
    text: edam:data_1284
    description: A gene map showing distances between loci based on relative cotransduction
      frequencies.
    meaning: edam:data_1284
    title: DNA transduction map
  edam:data_1285:
    text: edam:data_1285
    description: Sequence map of a single gene annotated with genetic features such
      as introns, exons, untranslated regions, polyA signals, promoters, enhancers
      and (possibly) mutations defining alleles of a gene.
    meaning: edam:data_1285
    title: Gene map
  edam:data_1286:
    text: edam:data_1286
    description: Sequence map of a plasmid (circular DNA).
    meaning: edam:data_1286
    title: Plasmid map
  edam:data_1288:
    text: edam:data_1288
    description: Sequence map of a whole genome.
    meaning: edam:data_1288
    title: Genome map
  edam:data_1289:
    text: edam:data_1289
    description: Image of the restriction enzyme cleavage sites (restriction sites)
      in a nucleic acid sequence.
    meaning: edam:data_1289
    title: Restriction map
  edam:data_1347:
    text: edam:data_1347
    description: Dirichlet distribution used by hidden Markov model analysis programs.
    meaning: edam:data_1347
    title: Dirichlet distribution
  edam:data_1352:
    text: edam:data_1352
    description: Regular expression pattern.
    meaning: edam:data_1352
    title: Regular expression
  edam:data_1353:
    text: edam:data_1353
    description: Any specific or conserved pattern (typically expressed as a regular
      expression) in a molecular sequence.
    meaning: edam:data_1353
    title: Sequence motif
  edam:data_1354:
    text: edam:data_1354
    description: Some type of statistical model representing a (typically multiple)
      sequence alignment.
    meaning: edam:data_1354
    title: Sequence profile
  edam:data_1355:
    text: edam:data_1355
    description: An informative report about a specific or conserved protein sequence
      pattern.
    meaning: edam:data_1355
    title: Protein signature
  edam:data_1361:
    text: edam:data_1361
    description: A profile (typically representing a sequence alignment) that is a
      simple matrix of nucleotide (or amino acid) counts per position.
    meaning: edam:data_1361
    title: Position frequency matrix
  edam:data_1362:
    text: edam:data_1362
    description: 'A profile (typically representing a sequence alignment) that is
      weighted matrix of nucleotide (or amino acid) counts per position.

      Contributions of individual sequences to the matrix might be uneven (weighted).'
    meaning: edam:data_1362
    title: Position weight matrix
  edam:data_1363:
    text: edam:data_1363
    description: A profile (typically representing a sequence alignment) derived from
      a matrix of nucleotide (or amino acid) counts per position that reflects information
      content at each position.
    meaning: edam:data_1363
    title: Information content matrix
  edam:data_1364:
    text: edam:data_1364
    description: A statistical Markov model of a system which is assumed to be a Markov
      process with unobserved (hidden) states. For example, a hidden Markov model
      representation of a set or alignment of sequences.
    meaning: edam:data_1364
    title: Hidden Markov model
  edam:data_1365:
    text: edam:data_1365
    description: One or more fingerprints (sequence classifiers) as used in the PRINTS
      database.
    meaning: edam:data_1365
    title: Fingerprint
  edam:data_1381:
    text: edam:data_1381
    description: Alignment of exactly two molecular sequences.
    meaning: edam:data_1381
    title: Pair sequence alignment
  edam:data_1383:
    text: edam:data_1383
    description: Alignment of multiple nucleotide sequences.
    meaning: edam:data_1383
    title: Nucleic acid sequence alignment
  edam:data_1384:
    text: edam:data_1384
    description: Alignment of multiple protein sequences.
    meaning: edam:data_1384
    title: Protein sequence alignment
  edam:data_1385:
    text: edam:data_1385
    description: 'Alignment of multiple molecular sequences of different types.

      Hybrid sequence alignments include for example genomic DNA to EST, cDNA or mRNA.'
    meaning: edam:data_1385
    title: Hybrid sequence alignment
  edam:data_1394:
    text: edam:data_1394
    description: A simple floating point number defining the penalty for opening or
      extending a gap in an alignment.
    meaning: edam:data_1394
    title: Alignment score or penalty
  edam:data_1397:
    text: edam:data_1397
    description: A penalty for opening a gap in an alignment.
    meaning: edam:data_1397
    title: Gap opening penalty
  edam:data_1398:
    text: edam:data_1398
    description: A penalty for extending a gap in an alignment.
    meaning: edam:data_1398
    title: Gap extension penalty
  edam:data_1399:
    text: edam:data_1399
    description: A penalty for gaps that are close together in an alignment.
    meaning: edam:data_1399
    title: Gap separation penalty
  edam:data_1401:
    text: edam:data_1401
    description: The score for a 'match' used in various sequence database search
      applications with simple scoring schemes.
    meaning: edam:data_1401
    title: Match reward score
  edam:data_1402:
    text: edam:data_1402
    description: The score (penalty) for a 'mismatch' used in various alignment and
      sequence database search applications with simple scoring schemes.
    meaning: edam:data_1402
    title: Mismatch penalty score
  edam:data_1403:
    text: edam:data_1403
    description: This is the threshold drop in score at which extension of word alignment
      is halted.
    meaning: edam:data_1403
    title: Drop off score
  edam:data_1410:
    text: edam:data_1410
    description: A number defining the penalty for opening gaps at the termini of
      an alignment, either from the N/C terminal of protein or 5'/3' terminal of nucleotide
      sequences.
    meaning: edam:data_1410
    title: Terminal gap opening penalty
  edam:data_1411:
    text: edam:data_1411
    description: A number defining the penalty for extending gaps at the termini of
      an alignment, either from the N/C terminal of protein or 5'/3' terminal of nucleotide
      sequences.
    meaning: edam:data_1411
    title: Terminal gap extension penalty
  edam:data_1412:
    text: edam:data_1412
    description: Sequence identity is the number (%) of matches (identical characters)
      in positions from an alignment of two molecular sequences.
    meaning: edam:data_1412
    title: Sequence identity
  edam:data_1413:
    text: edam:data_1413
    description: 'Data Type is float probably.

      Sequence similarity is the similarity (expressed as a percentage) of two molecular
      sequences calculated from their alignment, a scoring matrix for scoring characters
      substitutions and penalties for gap insertion and extension.'
    meaning: edam:data_1413
    title: Sequence similarity
  edam:data_1426:
    text: edam:data_1426
    description: Continuous quantitative data that may be read during phylogenetic
      tree calculation.
    meaning: edam:data_1426
    title: Phylogenetic continuous quantitative data
  edam:data_1427:
    text: edam:data_1427
    description: Character data with discrete states that may be read during phylogenetic
      tree calculation.
    meaning: edam:data_1427
    title: Phylogenetic discrete data
  edam:data_1428:
    text: edam:data_1428
    description: One or more cliques of mutually compatible characters that are generated,
      for example from analysis of discrete character data, and are used to generate
      a phylogeny.
    meaning: edam:data_1428
    title: Phylogenetic character cliques
  edam:data_1429:
    text: edam:data_1429
    description: Phylogenetic invariants data for testing alternative tree topologies.
    meaning: edam:data_1429
    title: Phylogenetic invariants
  edam:data_1439:
    text: edam:data_1439
    description: A model of DNA substitution that explains a DNA sequence alignment,
      derived from phylogenetic tree analysis.
    meaning: edam:data_1439
    title: DNA substitution model
  edam:data_1442:
    text: edam:data_1442
    description: Distances, such as Branch Score distance, between two or more phylogenetic
      trees.
    meaning: edam:data_1442
    title: Phylogenetic tree distances
  edam:data_1444:
    text: edam:data_1444
    description: Independent contrasts for characters used in a phylogenetic tree,
      or covariances, regressions and correlations between characters for those contrasts.
    meaning: edam:data_1444
    title: Phylogenetic character contrasts
  edam:data_1448:
    text: edam:data_1448
    description: Matrix of integer or floating point numbers for nucleotide comparison.
    meaning: edam:data_1448
    title: Comparison matrix (nucleotide)
  edam:data_1449:
    text: edam:data_1449
    description: Matrix of integer or floating point numbers for amino acid comparison.
    meaning: edam:data_1449
    title: Comparison matrix (amino acid)
  edam:data_1459:
    text: edam:data_1459
    description: 3D coordinate and associated data for a nucleic acid tertiary (3D)
      structure.
    meaning: edam:data_1459
    title: Nucleic acid structure
  edam:data_1460:
    text: edam:data_1460
    description: 3D coordinate and associated data for a protein tertiary (3D) structure,
      or part of a structure, possibly in complex with other molecules.
    meaning: edam:data_1460
    title: Protein structure
  edam:data_1461:
    text: edam:data_1461
    description: 'The structure of a protein in complex with a ligand, typically a
      small molecule such as an enzyme substrate or cofactor, but possibly another
      macromolecule.

      This includes interactions of proteins with atoms, ions and small molecules
      or macromolecules such as nucleic acids or other polypeptides. For stable inter-polypeptide
      interactions use ''Protein complex'' instead.'
    meaning: edam:data_1461
    title: Protein-ligand complex
  edam:data_1462:
    text: edam:data_1462
    description: 3D coordinate and associated data for a carbohydrate (3D) structure.
    meaning: edam:data_1462
    title: Carbohydrate structure
  edam:data_1463:
    text: edam:data_1463
    description: 3D coordinate and associated data for the (3D) structure of a small
      molecule, such as any common chemical compound.
    meaning: edam:data_1463
    title: Small molecule structure
  edam:data_1464:
    text: edam:data_1464
    description: 3D coordinate and associated data for a DNA tertiary (3D) structure.
    meaning: edam:data_1464
    title: DNA structure
  edam:data_1465:
    text: edam:data_1465
    description: 3D coordinate and associated data for an RNA tertiary (3D) structure.
    meaning: edam:data_1465
    title: RNA structure
  edam:data_1466:
    text: edam:data_1466
    description: 3D coordinate and associated data for a tRNA tertiary (3D) structure,
      including tmRNA, snoRNAs etc.
    meaning: edam:data_1466
    title: tRNA structure
  edam:data_1467:
    text: edam:data_1467
    description: 3D coordinate and associated data for the tertiary (3D) structure
      of a polypeptide chain.
    meaning: edam:data_1467
    title: Protein chain
  edam:data_1468:
    text: edam:data_1468
    description: 3D coordinate and associated data for the tertiary (3D) structure
      of a protein domain.
    meaning: edam:data_1468
    title: Protein domain
  edam:data_1470:
    text: edam:data_1470
    description: '3D coordinate and associated data for a protein tertiary (3D) structure
      (typically C-alpha atoms only).

      C-beta atoms from amino acid side-chains may be included.'
    meaning: edam:data_1470
    title: C-alpha trace
  edam:data_1479:
    text: edam:data_1479
    description: Alignment (superimposition) of exactly two molecular tertiary (3D)
      structures.
    meaning: edam:data_1479
    title: Structure alignment (pair)
  edam:data_1481:
    text: edam:data_1481
    description: Alignment (superimposition) of protein tertiary (3D) structures.
    meaning: edam:data_1481
    title: Protein structure alignment
  edam:data_1482:
    text: edam:data_1482
    description: Alignment (superimposition) of nucleic acid tertiary (3D) structures.
    meaning: edam:data_1482
    title: Nucleic acid structure alignment
  edam:data_1493:
    text: edam:data_1493
    description: Alignment (superimposition) of RNA tertiary (3D) structures.
    meaning: edam:data_1493
    title: RNA structure alignment
  edam:data_1494:
    text: edam:data_1494
    description: Matrix to transform (rotate/translate) 3D coordinates, typically
      the transformation necessary to superimpose two molecular structures.
    meaning: edam:data_1494
    title: Structural transformation matrix
  edam:data_1497:
    text: edam:data_1497
    description: Root-mean-square deviation (RMSD) is calculated to measure the average
      distance between superimposed macromolecular coordinates.
    meaning: edam:data_1497
    title: Root-mean-square deviation
  edam:data_1498:
    text: edam:data_1498
    description: 'A ligand fingerprint is derived from ligand structural data from
      a Protein DataBank file. It reflects the elements or groups present or absent,
      covalent bonds and bond orders and the bonded environment in terms of SATIS
      codes and BLEEP atom types.

      A measure of the similarity between two ligand fingerprints.'
    meaning: edam:data_1498
    title: Tanimoto similarity score
  edam:data_1499:
    text: edam:data_1499
    description: A matrix of 3D-1D scores reflecting the probability of amino acids
      to occur in different tertiary structural environments.
    meaning: edam:data_1499
    title: 3D-1D scoring matrix
  edam:data_1501:
    text: edam:data_1501
    description: A table of 20 numerical values which quantify a property (e.g. physicochemical
      or biochemical) of the common amino acids.
    meaning: edam:data_1501
    title: Amino acid index
  edam:data_1502:
    text: edam:data_1502
    description: Chemical classification (small, aliphatic, aromatic, polar, charged
      etc) of amino acids.
    meaning: edam:data_1502
    title: Amino acid index (chemical classes)
  edam:data_1503:
    text: edam:data_1503
    description: Statistical protein contact potentials.
    meaning: edam:data_1503
    title: Amino acid pair-wise contact potentials
  edam:data_1505:
    text: edam:data_1505
    description: Molecular weights of amino acids.
    meaning: edam:data_1505
    title: Amino acid index (molecular weight)
  edam:data_1506:
    text: edam:data_1506
    description: Hydrophobic, hydrophilic or charge properties of amino acids.
    meaning: edam:data_1506
    title: Amino acid index (hydropathy)
  edam:data_1507:
    text: edam:data_1507
    description: Experimental free energy values for the water-interface and water-octanol
      transitions for the amino acids.
    meaning: edam:data_1507
    title: Amino acid index (White-Wimley data)
  edam:data_1508:
    text: edam:data_1508
    description: Van der Waals radii of atoms for different amino acid residues.
    meaning: edam:data_1508
    title: Amino acid index (van der Waals radii)
  edam:data_1519:
    text: edam:data_1519
    description: 'List of molecular weight(s) of one or more proteins or peptides,
      for example cut by proteolytic enzymes or reagents.

      The report might include associated data such as frequency of peptide fragment
      molecular weights.'
    meaning: edam:data_1519
    title: Peptide molecular weights
  edam:data_1520:
    text: edam:data_1520
    description: 'Hydrophobic moment is a peptides hydrophobicity measured for different
      angles of rotation.

      Report on the hydrophobic moment of a polypeptide sequence.'
    meaning: edam:data_1520
    title: Peptide hydrophobic moment
  edam:data_1521:
    text: edam:data_1521
    description: 'The aliphatic index is the relative protein volume occupied by aliphatic
      side chains.

      The aliphatic index of a protein.'
    meaning: edam:data_1521
    title: Protein aliphatic index
  edam:data_1522:
    text: edam:data_1522
    description: 'A protein sequence with annotation on hydrophobic or hydrophilic
      / charged regions, hydrophobicity plot etc.

      Hydrophobic moment is a peptides hydrophobicity measured for different angles
      of rotation.'
    meaning: edam:data_1522
    title: Protein sequence hydropathy plot
  edam:data_1523:
    text: edam:data_1523
    description: A plot of the mean charge of the amino acids within a window of specified
      length as the window is moved along a protein sequence.
    meaning: edam:data_1523
    title: Protein charge plot
  edam:data_1524:
    text: edam:data_1524
    description: The solubility or atomic solvation energy of a protein sequence or
      structure.
    meaning: edam:data_1524
    title: Protein solubility
  edam:data_1525:
    text: edam:data_1525
    description: Data on the crystallizability of a protein sequence.
    meaning: edam:data_1525
    title: Protein crystallizability
  edam:data_1526:
    text: edam:data_1526
    description: Data on the stability, intrinsic disorder or globularity of a protein
      sequence.
    meaning: edam:data_1526
    title: Protein globularity
  edam:data_1527:
    text: edam:data_1527
    description: The titration curve of a protein.
    meaning: edam:data_1527
    title: Protein titration curve
  edam:data_1528:
    text: edam:data_1528
    description: The isoelectric point of one proteins.
    meaning: edam:data_1528
    title: Protein isoelectric point
  edam:data_1529:
    text: edam:data_1529
    description: The pKa value of a protein.
    meaning: edam:data_1529
    title: Protein pKa value
  edam:data_1530:
    text: edam:data_1530
    description: The hydrogen exchange rate of a protein.
    meaning: edam:data_1530
    title: Protein hydrogen exchange rate
  edam:data_1531:
    text: edam:data_1531
    description: The extinction coefficient of a protein.
    meaning: edam:data_1531
    title: Protein extinction coefficient
  edam:data_1532:
    text: edam:data_1532
    description: The optical density of a protein.
    meaning: edam:data_1532
    title: Protein optical density
  edam:data_1534:
    text: edam:data_1534
    description: 'An report on allergenicity / immunogenicity of peptides and proteins.

      This includes data on peptide ligands that elicit an immune response (immunogens),
      allergic cross-reactivity, predicted antigenicity (Hopp and Woods plot) etc.
      These data are useful in the development of peptide-specific antibodies or multi-epitope
      vaccines. Methods might use sequence data (for example motifs) and / or structural
      data.'
    meaning: edam:data_1534
    title: Peptide immunogenicity data
  edam:data_1537:
    text: edam:data_1537
    description: A human-readable collection of information about one or more specific
      protein 3D structure(s) or structural domains.
    meaning: edam:data_1537
    title: Protein structure report
  edam:data_1539:
    text: edam:data_1539
    description: 'Model validation might involve checks for atomic packing, steric
      clashes, agreement with electron density maps etc.

      Report on the quality of a protein three-dimensional model.'
    meaning: edam:data_1539
    title: Protein structural quality report
  edam:data_1542:
    text: edam:data_1542
    description: 'Data on the solvent accessible or buried surface area of a protein
      structure.

      This concept covers definitions of the protein surface, interior and interfaces,
      accessible and buried residues, surface accessible pockets, interior inaccessible
      cavities etc.'
    meaning: edam:data_1542
    title: Protein solvent accessibility
  edam:data_1544:
    text: edam:data_1544
    description: Phi/psi angle data or a Ramachandran plot of a protein structure.
    meaning: edam:data_1544
    title: Ramachandran plot
  edam:data_1545:
    text: edam:data_1545
    description: Data on the net charge distribution (dipole moment) of a protein
      structure.
    meaning: edam:data_1545
    title: Protein dipole moment
  edam:data_1546:
    text: edam:data_1546
    description: A matrix of distances between amino acid residues (for example the
      C-alpha atoms) in a protein structure.
    meaning: edam:data_1546
    title: Protein distance matrix
  edam:data_1547:
    text: edam:data_1547
    description: An amino acid residue contact map for a protein structure.
    meaning: edam:data_1547
    title: Protein contact map
  edam:data_1548:
    text: edam:data_1548
    description: Report on clusters of contacting residues in protein structures such
      as a key structural residue network.
    meaning: edam:data_1548
    title: Protein residue 3D cluster
  edam:data_1549:
    text: edam:data_1549
    description: Patterns of hydrogen bonding in protein structures.
    meaning: edam:data_1549
    title: Protein hydrogen bonds
  edam:data_1566:
    text: edam:data_1566
    description: An informative report on protein-ligand (small molecule) interaction(s).
    meaning: edam:data_1566
    title: Protein-ligand interaction report
  edam:data_1583:
    text: edam:data_1583
    description: 'A melting (stability) profile calculated the free energy required
      to unwind and separate the nucleic acid strands, plotted for sliding windows
      over a sequence.

      Data on the dissociation characteristics of a double-stranded nucleic acid molecule
      (DNA or a DNA/RNA hybrid) during heating.

      Nucleic acid melting curve: a melting curve of a double-stranded nucleic acid
      molecule (DNA or DNA/RNA). Shows the proportion of nucleic acid which are double-stranded
      versus temperature.

      Nucleic acid probability profile: a probability profile of a double-stranded
      nucleic acid molecule (DNA or DNA/RNA). Shows the probability of a base pair
      not being melted (i.e. remaining as double-stranded DNA) at a specified temperature

      Nucleic acid stitch profile: stitch profile of hybridised or double stranded
      nucleic acid (DNA or RNA/DNA). A stitch profile diagram shows partly melted
      DNA conformations (with probabilities) at a range of temperatures. For example,
      a stitch profile might show possible loop openings with their location, size,
      probability and fluctuations at a given temperature.

      Nucleic acid temperature profile: a temperature profile of a double-stranded
      nucleic acid molecule (DNA or DNA/RNA). Plots melting temperature versus base
      position.'
    meaning: edam:data_1583
    title: Nucleic acid melting profile
  edam:data_1584:
    text: edam:data_1584
    description: Enthalpy of hybridised or double stranded nucleic acid (DNA or RNA/DNA).
    meaning: edam:data_1584
    title: Nucleic acid enthalpy
  edam:data_1585:
    text: edam:data_1585
    description: Entropy of hybridised or double stranded nucleic acid (DNA or RNA/DNA).
    meaning: edam:data_1585
    title: Nucleic acid entropy
  edam:data_1588:
    text: edam:data_1588
    description: DNA base pair stacking energies data.
    meaning: edam:data_1588
    title: DNA base pair stacking energies data
  edam:data_1589:
    text: edam:data_1589
    description: DNA base pair twist angle data.
    meaning: edam:data_1589
    title: DNA base pair twist angle data
  edam:data_1590:
    text: edam:data_1590
    description: DNA base trimer roll angles data.
    meaning: edam:data_1590
    title: DNA base trimer roll angles data
  edam:data_1595:
    text: edam:data_1595
    description: 'Dotplot of RNA base pairing probability matrix.

      Such as generated by the Vienna package.'
    meaning: edam:data_1595
    title: Base pairing probability matrix dotplot
  edam:data_1596:
    text: edam:data_1596
    description: A human-readable collection of information about RNA/DNA folding,
      minimum folding energies for DNA or RNA sequences, energy landscape of RNA mutants
      etc.
    meaning: edam:data_1596
    title: Nucleic acid folding report
  edam:data_1597:
    text: edam:data_1597
    description: 'A codon usage table might include the codon usage table name, optional
      comments and a table with columns for codons and corresponding codon usage data.
      A genetic code can be extracted from or represented by a codon usage table.

      Table of codon usage data calculated from one or more nucleic acid sequences.'
    meaning: edam:data_1597
    title: Codon usage table
  edam:data_1598:
    text: edam:data_1598
    description: 'A genetic code for an organism.

      A genetic code need not include detailed codon usage information.'
    meaning: edam:data_1598
    title: Genetic code
  edam:data_1600:
    text: edam:data_1600
    description: A plot of the synonymous codon usage calculated for windows over
      a nucleotide sequence.
    meaning: edam:data_1600
    title: Codon usage bias plot
  edam:data_1602:
    text: edam:data_1602
    description: The differences in codon usage fractions between two codon usage
      tables.
    meaning: edam:data_1602
    title: Codon usage fraction difference
  edam:data_1621:
    text: edam:data_1621
    description: 'A human-readable collection of information about the influence of
      genotype on drug response.

      The report might correlate gene expression or single-nucleotide polymorphisms
      with drug efficacy or toxicity.'
    meaning: edam:data_1621
    title: Pharmacogenomic test report
  edam:data_1622:
    text: edam:data_1622
    description: 'A human-readable collection of information about a specific disease.

      For example, an informative report on a specific tumor including nature and
      origin of the sample, anatomic site, organ or tissue, tumor type, including
      morphology and/or histologic type, and so on.'
    meaning: edam:data_1622
    title: Disease report
  edam:data_1636:
    text: edam:data_1636
    description: A graphical 2D tabular representation of expression data, typically
      derived from an omics experiment. A heat map is a table where rows and columns
      correspond to different features and contexts (for example, cells or samples)
      and the cell colour represents the level of expression of a gene that context.
    meaning: edam:data_1636
    title: Heat map
  edam:data_1667:
    text: edam:data_1667
    description: 'A simple floating point number defining the lower or upper limit
      of an expectation value (E-value).

      An expectation value (E-Value) is the expected number of observations which
      are at least as extreme as observations expected to occur by random chance.
      The E-value describes the number of hits with a given score or better that are
      expected to occur at random when searching a database of a particular size.
      It decreases exponentially with the score (S) of a hit. A low E value indicates
      a more significant score.'
    meaning: edam:data_1667
    title: E-value
  edam:data_1668:
    text: edam:data_1668
    description: 'A z-value might be specified as a threshold for reporting hits from
      database searches.

      The z-value is the number of standard deviations a data value is above or below
      a mean value.'
    meaning: edam:data_1668
    title: Z-value
  edam:data_1669:
    text: edam:data_1669
    description: 'A z-value might be specified as a threshold for reporting hits from
      database searches.

      The P-value is the probability of obtaining by random chance a result that is
      at least as extreme as an observed result, assuming a NULL hypothesis is true.'
    meaning: edam:data_1669
    title: P-value
  edam:data_1689:
    text: edam:data_1689
    description: A username on a computer system or a website.
    meaning: edam:data_1689
    title: Username
  edam:data_1690:
    text: edam:data_1690
    description: A password on a computer system, or a website.
    meaning: edam:data_1690
    title: Password
  edam:data_1691:
    text: edam:data_1691
    description: A valid email address of an end-user.
    meaning: edam:data_1691
    title: Email address
  edam:data_1692:
    text: edam:data_1692
    description: The name of a person.
    meaning: edam:data_1692
    title: Person name
  edam:data_1696:
    text: edam:data_1696
    description: 'A drug structure relationship map is report (typically a map diagram)
      of drug structure relationships.

      A human-readable collection of information about a specific drug.'
    meaning: edam:data_1696
    title: Drug report
  edam:data_1707:
    text: edam:data_1707
    description: 'An image (for viewing or printing) of a phylogenetic tree including
      (typically) a plot of rooted or unrooted phylogenies, cladograms, circular trees
      or phenograms and associated information.

      See also ''Phylogenetic tree'''
    meaning: edam:data_1707
    title: Phylogenetic tree image
  edam:data_1708:
    text: edam:data_1708
    description: Image of RNA secondary structure, knots, pseudoknots etc.
    meaning: edam:data_1708
    title: RNA secondary structure image
  edam:data_1709:
    text: edam:data_1709
    description: Image of protein secondary structure.
    meaning: edam:data_1709
    title: Protein secondary structure image
  edam:data_1710:
    text: edam:data_1710
    description: Image of one or more molecular tertiary (3D) structures.
    meaning: edam:data_1710
    title: Structure image
  edam:data_1711:
    text: edam:data_1711
    description: Image of two or more aligned molecular sequences possibly annotated
      with alignment features.
    meaning: edam:data_1711
    title: Sequence alignment image
  edam:data_1712:
    text: edam:data_1712
    description: 'An image of the structure of a small chemical compound.

      The molecular identifier and formula are typically included.'
    meaning: edam:data_1712
    title: Chemical structure image
  edam:data_1713:
    text: edam:data_1713
    description: A fate map is a plan of early stage of an embryo such as a blastula,
      showing areas that are significance to development.
    meaning: edam:data_1713
    title: Fate map
  edam:data_1714:
    text: edam:data_1714
    description: An image of spots from a microarray experiment.
    meaning: edam:data_1714
    title: Microarray spots image
  edam:data_1731:
    text: edam:data_1731
    description: The definition of a concept from an ontology.
    meaning: edam:data_1731
    title: Ontology concept definition
  edam:data_1742:
    text: edam:data_1742
    description: A residue identifier (a string) from a PDB file.
    meaning: edam:data_1742
    title: PDB residue number
  edam:data_1743:
    text: edam:data_1743
    description: Cartesian coordinate of an atom (in a molecular structure).
    meaning: edam:data_1743
    title: Atomic coordinate
  edam:data_1748:
    text: edam:data_1748
    description: Identifier (a string) of a specific atom from a PDB file for a molecular
      structure.
    meaning: edam:data_1748
    title: PDB atom name
  edam:data_1755:
    text: edam:data_1755
    description: 'Data on a single atom from a protein structure.

      This is a broad data type and is used a placeholder for other, more specific
      types. It is primarily intended to help navigation of EDAM and would not typically
      be used for annotation.'
    meaning: edam:data_1755
    title: Protein atom
  edam:data_1756:
    text: edam:data_1756
    description: 'Data on a single amino acid residue position in a protein structure.

      This is a broad data type and is used a placeholder for other, more specific
      types. It is primarily intended to help navigation of EDAM and would not typically
      be used for annotation.'
    meaning: edam:data_1756
    title: Protein residue
  edam:data_1757:
    text: edam:data_1757
    description: Name of an atom.
    meaning: edam:data_1757
    title: Atom name
  edam:data_1758:
    text: edam:data_1758
    description: Three-letter amino acid residue names as used in PDB files.
    meaning: edam:data_1758
    title: PDB residue name
  edam:data_1759:
    text: edam:data_1759
    description: Identifier of a model structure from a PDB file.
    meaning: edam:data_1759
    title: PDB model number
  edam:data_1771:
    text: edam:data_1771
    description: Information on an molecular sequence version.
    meaning: edam:data_1771
    title: Sequence version
  edam:data_1772:
    text: edam:data_1772
    description: A numerical value, that is some type of scored value arising for
      example from a prediction method.
    meaning: edam:data_1772
    title: Score
  edam:data_1794:
    text: edam:data_1794
    description: Identifier of a gene from PlasmoDB Plasmodium Genome Resource.
    meaning: edam:data_1794
    title: Gene ID (PlasmoDB)
  edam:data_1795:
    text: edam:data_1795
    description: Identifier of a gene from EcoGene Database.
    meaning: edam:data_1795
    title: Gene ID (EcoGene)
  edam:data_1796:
    text: edam:data_1796
    description: Gene identifier from FlyBase database.
    meaning: edam:data_1796
    title: Gene ID (FlyBase)
  edam:data_1802:
    text: edam:data_1802
    description: Gene identifier from Gramene database.
    meaning: edam:data_1802
    title: Gene ID (Gramene)
  edam:data_1803:
    text: edam:data_1803
    description: Gene identifier from Virginia Bioinformatics Institute microbial
      database.
    meaning: edam:data_1803
    title: Gene ID (Virginia microbial)
  edam:data_1804:
    text: edam:data_1804
    description: Gene identifier from Sol Genomics Network.
    meaning: edam:data_1804
    title: Gene ID (SGN)
  edam:data_1805:
    text: edam:data_1805
    description: Gene identifier used by WormBase database.
    meaning: edam:data_1805
    title: Gene ID (WormBase)
  edam:data_1807:
    text: edam:data_1807
    description: The name of an open reading frame attributed by a sequencing project.
    meaning: edam:data_1807
    title: ORF name
  edam:data_1855:
    text: edam:data_1855
    description: An identifier of a clone (cloned molecular sequence) from a database.
    meaning: edam:data_1855
    title: Clone ID
  edam:data_1856:
    text: edam:data_1856
    description: An insertion code (part of the residue number) for an amino acid
      residue from a PDB file.
    meaning: edam:data_1856
    title: PDB insertion code
  edam:data_1857:
    text: edam:data_1857
    description: 'The fraction of an atom type present at a site in a molecular structure.

      The sum of the occupancies of all the atom types at a site should not normally
      significantly exceed 1.0.'
    meaning: edam:data_1857
    title: Atomic occupancy
  edam:data_1858:
    text: edam:data_1858
    description: Isotropic B factor (atomic displacement parameter) for an atom from
      a PDB file.
    meaning: edam:data_1858
    title: Isotropic B factor
  edam:data_1859:
    text: edam:data_1859
    description: 'A cytogenetic map is built from a set of mutant cell lines with
      sub-chromosomal deletions and a reference wild-type line (''genome deletion
      panel''). The panel is used to map markers onto the genome by comparing mutant
      to wild-type banding patterns. Markers are linked (occur in the same deleted
      region) if they share the same banding pattern (presence or absence) as the
      deletion panel.

      A cytogenetic map showing chromosome banding patterns in mutant cell lines relative
      to the wild type.'
    meaning: edam:data_1859
    title: Deletion map
  edam:data_1860:
    text: edam:data_1860
    description: A genetic map which shows the approximate location of quantitative
      trait loci (QTL) between two or more markers.
    meaning: edam:data_1860
    title: QTL map
  edam:data_1863:
    text: edam:data_1863
    description: A map of haplotypes in a genome or other sequence, describing common
      patterns of genetic variation.
    meaning: edam:data_1863
    title: Haplotype map
  edam:data_1867:
    text: edam:data_1867
    description: The name of a protein fold.
    meaning: edam:data_1867
    title: Protein fold name
  edam:data_1868:
    text: edam:data_1868
    description: 'For a complete list of taxonomic ranks see https://www.phenoscape.org/wiki/Taxonomic_Rank_Vocabulary.

      The name of a group of organisms belonging to the same taxonomic rank.'
    meaning: edam:data_1868
    title: Taxon
  edam:data_1869:
    text: edam:data_1869
    description: A unique identifier of a (group of) organisms.
    meaning: edam:data_1869
    title: Organism identifier
  edam:data_1870:
    text: edam:data_1870
    description: The name of a genus of organism.
    meaning: edam:data_1870
    title: Genus name
  edam:data_1872:
    text: edam:data_1872
    description: 'Name components correspond to levels in a taxonomic hierarchy (e.g.
      ''Genus'', ''Species'', etc.) Meta information such as a reference where the
      name was defined and a date might be included.

      The full name for a group of organisms, reflecting their biological classification
      and (usually) conforming to a standard nomenclature.'
    meaning: edam:data_1872
    title: Taxonomic classification
  edam:data_1873:
    text: edam:data_1873
    description: A unique identifier for an organism used in the iHOP database.
    meaning: edam:data_1873
    title: iHOP organism ID
  edam:data_1874:
    text: edam:data_1874
    description: Common name for an organism as used in the GenBank database.
    meaning: edam:data_1874
    title: Genbank common name
  edam:data_1875:
    text: edam:data_1875
    description: The name of a taxon from the NCBI taxonomy database.
    meaning: edam:data_1875
    title: NCBI taxon
  edam:data_1881:
    text: edam:data_1881
    description: Information on the authors of a published work.
    meaning: edam:data_1881
    title: Author ID
  edam:data_1882:
    text: edam:data_1882
    description: An identifier representing an author in the DragonDB database.
    meaning: edam:data_1882
    title: DragonDB author identifier
  edam:data_1883:
    text: edam:data_1883
    description: A URI along with annotation describing the data found at the address.
    meaning: edam:data_1883
    title: Annotated URI
  edam:data_1885:
    text: edam:data_1885
    description: Identifier of a gene from the GeneFarm database.
    meaning: edam:data_1885
    title: Gene ID (GeneFarm)
  edam:data_1886:
    text: edam:data_1886
    description: The blattner identifier for a gene.
    meaning: edam:data_1886
    title: Blattner number
  edam:data_1891:
    text: edam:data_1891
    description: A unique identifier of a protein or gene used in the iHOP database.
    meaning: edam:data_1891
    title: iHOP symbol
  edam:data_1893:
    text: edam:data_1893
    description: A unique name or other identifier of a genetic locus, typically conforming
      to a scheme that names loci (such as predicted genes) depending on their position
      in a molecular sequence, for example a completely sequenced genome or chromosome.
    meaning: edam:data_1893
    title: Locus ID
  edam:data_1895:
    text: edam:data_1895
    description: Locus identifier for Arabidopsis Genome Initiative (TAIR, TIGR and
      MIPS databases).
    meaning: edam:data_1895
    title: Locus ID (AGI)
  edam:data_1896:
    text: edam:data_1896
    description: Identifier for loci from ASPGD (Aspergillus Genome Database).
    meaning: edam:data_1896
    title: Locus ID (ASPGD)
  edam:data_1897:
    text: edam:data_1897
    description: Identifier for loci from Magnaporthe grisea Database at the Broad
      Institute.
    meaning: edam:data_1897
    title: Locus ID (MGG)
  edam:data_1898:
    text: edam:data_1898
    description: Identifier for loci from CGD (Candida Genome Database).
    meaning: edam:data_1898
    title: Locus ID (CGD)
  edam:data_1899:
    text: edam:data_1899
    description: Locus identifier for Comprehensive Microbial Resource at the J. Craig
      Venter Institute.
    meaning: edam:data_1899
    title: Locus ID (CMR)
  edam:data_1900:
    text: edam:data_1900
    description: Identifier for loci from NCBI database.
    meaning: edam:data_1900
    title: NCBI locus tag
  edam:data_1901:
    text: edam:data_1901
    description: Identifier for loci from SGD (Saccharomyces Genome Database).
    meaning: edam:data_1901
    title: Locus ID (SGD)
  edam:data_1902:
    text: edam:data_1902
    description: Identifier of loci from Maize Mapping Project.
    meaning: edam:data_1902
    title: Locus ID (MMP)
  edam:data_1903:
    text: edam:data_1903
    description: Identifier of locus from DictyBase (Dictyostelium discoideum).
    meaning: edam:data_1903
    title: Locus ID (DictyBase)
  edam:data_1904:
    text: edam:data_1904
    description: Identifier of a locus from EntrezGene database.
    meaning: edam:data_1904
    title: Locus ID (EntrezGene)
  edam:data_1905:
    text: edam:data_1905
    description: Identifier of locus from MaizeGDB (Maize genome database).
    meaning: edam:data_1905
    title: Locus ID (MaizeGDB)
  edam:data_1907:
    text: edam:data_1907
    description: Identifier of a gene from the KOME database.
    meaning: edam:data_1907
    title: Gene ID (KOME)
  edam:data_1908:
    text: edam:data_1908
    description: Identifier of a locus from the Tropgene database.
    meaning: edam:data_1908
    title: Locus ID (Tropgene)
  edam:data_1916:
    text: edam:data_1916
    description: An alignment of molecular sequences, structures or profiles derived
      from them.
    meaning: edam:data_1916
    title: Alignment
  edam:data_1917:
    text: edam:data_1917
    description: Data for an atom (in a molecular structure).
    meaning: edam:data_1917
    title: Atomic property
  edam:data_2007:
    text: edam:data_2007
    description: A word or phrase that can appear in the keywords field (KW line)
      of entries from the UniProt database.
    meaning: edam:data_2007
    title: UniProt keyword
  edam:data_2012:
    text: edam:data_2012
    description: 'A position in a map (for example a genetic map), either a single
      position (point) or a region / interval.

      This includes positions in genomes based on a reference sequence. A position
      may be specified for any mappable object, i.e. anything that may have positional
      information such as a physical position in a chromosome. Data might include
      sequence region name, strand, coordinate system name, assembly name, start position
      and end position.'
    meaning: edam:data_2012
    title: Sequence coordinates
  edam:data_2016:
    text: edam:data_2016
    description: Data concerning the intrinsic physical (e.g. structural) or chemical
      properties of one, more or all amino acids.
    meaning: edam:data_2016
    title: Amino acid property
  edam:data_2019:
    text: edam:data_2019
    description: Data describing a molecular map (genetic or physical) or a set of
      such maps, including various attributes of, data extracted from or derived from
      the analysis of them, but excluding the map(s) themselves. This includes metadata
      for map sets that share a common set of features which are mapped.
    meaning: edam:data_2019
    title: Map data
  edam:data_2024:
    text: edam:data_2024
    description: 'Data concerning chemical reaction(s) catalysed by enzyme(s).

      This is a broad data type and is used a placeholder for other, more specific
      types.'
    meaning: edam:data_2024
    title: Enzyme kinetics data
  edam:data_2025:
    text: edam:data_2025
    description: A plot giving an approximation of the kinetics of an enzyme-catalysed
      reaction, assuming simple kinetics (i.e. no intermediate or product inhibition,
      allostericity or cooperativity). It plots initial reaction rate to the substrate
      concentration (S) from which the maximum rate (vmax) is apparent.
    meaning: edam:data_2025
    title: Michaelis Menten plot
  edam:data_2026:
    text: edam:data_2026
    description: A plot based on the Michaelis Menten equation of enzyme kinetics
      plotting the ratio of the initial substrate concentration (S) against the reaction
      velocity (v).
    meaning: edam:data_2026
    title: Hanes Woolf plot
  edam:data_2042:
    text: edam:data_2042
    description: Typically a human-readable summary of body of facts or information
      indicating why a statement is true or valid. This may include a computational
      prediction, laboratory experiment, literature reference etc.
    meaning: edam:data_2042
    title: Evidence
  edam:data_2044:
    text: edam:data_2044
    description: 'One or more molecular sequences, possibly with associated annotation.

      This concept is a placeholder of concepts for primary sequence data including
      raw sequences and sequence records. It should not normally be used for derivatives
      such as sequence alignments, motifs or profiles.'
    meaning: edam:data_2044
    title: Sequence
  edam:data_2048:
    text: edam:data_2048
    description: 'A human-readable collection of information including annotation
      on a biological entity or phenomena, computer-generated reports of analysis
      of primary data (e.g. sequence or structural), and metadata (data about primary
      data) or any other free (essentially unformatted) text, as distinct from the
      primary data itself.

      You can use this term by default for any textual report, in case you can''t
      find another, more specific term. Reports may be generated automatically or
      collated by hand and can include metadata on the origin, source, history, ownership
      or location of some thing.'
    meaning: edam:data_2048
    title: Report
  edam:data_2050:
    text: edam:data_2050
    description: General data for a molecule.
    meaning: edam:data_2050
    title: Molecular property (general)
  edam:data_2070:
    text: edam:data_2070
    description: A nucleotide sequence motif.
    meaning: edam:data_2070
    title: Sequence motif (nucleic acid)
  edam:data_2071:
    text: edam:data_2071
    description: An amino acid sequence motif.
    meaning: edam:data_2071
    title: Sequence motif (protein)
  edam:data_2080:
    text: edam:data_2080
    description: A report of hits from searching a database of some type.
    meaning: edam:data_2080
    title: Database search results
  edam:data_2082:
    text: edam:data_2082
    description: 'An array of numerical values.

      This is a broad data type and is used a placeholder for other, more specific
      types.'
    meaning: edam:data_2082
    title: Matrix
  edam:data_2084:
    text: edam:data_2084
    description: A human-readable collection of information about one or more specific
      nucleic acid molecules.
    meaning: edam:data_2084
    title: Nucleic acid report
  edam:data_2085:
    text: edam:data_2085
    description: A human-readable collection of information about one or more molecular
      tertiary (3D) structures. It might include annotation on the structure, a computer-generated
      report of analysis of structural data, and metadata (data about primary data)
      or any other free (essentially unformatted) text, as distinct from the primary
      data itself.
    meaning: edam:data_2085
    title: Structure report
  edam:data_2087:
    text: edam:data_2087
    description: A report on the physical (e.g. structural) or chemical properties
      of molecules, or parts of a molecule.
    meaning: edam:data_2087
    title: Molecular property
  edam:data_2088:
    text: edam:data_2088
    description: Structural data for DNA base pairs or runs of bases, such as energy
      or angle data.
    meaning: edam:data_2088
    title: DNA base structural data
  edam:data_2091:
    text: edam:data_2091
    description: A persistent (stable) and unique identifier, typically identifying
      an object (entry) from a database.
    meaning: edam:data_2091
    title: Accession
  edam:data_2093:
    text: edam:data_2093
    description: 'A list of database accessions or identifiers are usually included.

      Reference to a dataset (or a cross-reference between two datasets), typically
      one or more entries in a biological database or ontology.'
    meaning: edam:data_2093
    title: Data reference
  edam:data_2098:
    text: edam:data_2098
    description: An identifier of a submitted job.
    meaning: edam:data_2098
    title: Job identifier
  edam:data_2099:
    text: edam:data_2099
    description: A name of a thing, which need not necessarily uniquely identify it.
    meaning: edam:data_2099
    title: Name
  edam:data_2101:
    text: edam:data_2101
    description: Authentication data usually used to log in into an account on an
      information system such as a web application or a database.
    meaning: edam:data_2101
    title: Account authentication
  edam:data_2102:
    text: edam:data_2102
    description: A three-letter code used in the KEGG databases to uniquely identify
      organisms.
    meaning: edam:data_2102
    title: KEGG organism code
  edam:data_2104:
    text: edam:data_2104
    description: Identifier of an object from one of the BioCyc databases.
    meaning: edam:data_2104
    title: BioCyc ID
  edam:data_2105:
    text: edam:data_2105
    description: Identifier of a compound from the BioCyc chemical compounds database.
    meaning: edam:data_2105
    title: Compound ID (BioCyc)
  edam:data_2106:
    text: edam:data_2106
    description: Identifier of a biological reaction from the BioCyc reactions database.
    meaning: edam:data_2106
    title: Reaction ID (BioCyc)
  edam:data_2107:
    text: edam:data_2107
    description: Identifier of an enzyme from the BioCyc enzymes database.
    meaning: edam:data_2107
    title: Enzyme ID (BioCyc)
  edam:data_2108:
    text: edam:data_2108
    description: Identifier of a biological reaction from a database.
    meaning: edam:data_2108
    title: Reaction ID
  edam:data_2109:
    text: edam:data_2109
    description: 'An identifier that is re-used for data objects of fundamentally
      different types (typically served from a single database).

      This branch provides an alternative organisation of the concepts nested under
      ''Accession'' and ''Name''. All concepts under here are already included under
      ''Accession'' or ''Name''.'
    meaning: edam:data_2109
    title: Identifier (hybrid)
  edam:data_2110:
    text: edam:data_2110
    description: Identifier of a molecular property.
    meaning: edam:data_2110
    title: Molecular property identifier
  edam:data_2111:
    text: edam:data_2111
    description: Identifier of a codon usage table, for example a genetic code.
    meaning: edam:data_2111
    title: Codon usage table ID
  edam:data_2112:
    text: edam:data_2112
    description: Primary identifier of an object from the FlyBase database.
    meaning: edam:data_2112
    title: FlyBase primary identifier
  edam:data_2113:
    text: edam:data_2113
    description: Identifier of an object from the WormBase database.
    meaning: edam:data_2113
    title: WormBase identifier
  edam:data_2114:
    text: edam:data_2114
    description: Protein identifier used by WormBase database.
    meaning: edam:data_2114
    title: WormBase wormpep ID
  edam:data_2117:
    text: edam:data_2117
    description: An identifier of a map of a molecular sequence.
    meaning: edam:data_2117
    title: Map identifier
  edam:data_2118:
    text: edam:data_2118
    description: An identifier of a software end-user on a website or a database (typically
      a person or an entity).
    meaning: edam:data_2118
    title: Person identifier
  edam:data_2119:
    text: edam:data_2119
    description: Name or other identifier of a nucleic acid molecule.
    meaning: edam:data_2119
    title: Nucleic acid identifier
  edam:data_2127:
    text: edam:data_2127
    description: An identifier of a genetic code.
    meaning: edam:data_2127
    title: Genetic code identifier
  edam:data_2128:
    text: edam:data_2128
    description: Informal name for a genetic code, typically an organism name.
    meaning: edam:data_2128
    title: Genetic code name
  edam:data_2129:
    text: edam:data_2129
    description: Name of a file format such as HTML, PNG, PDF, EMBL, GenBank and so
      on.
    meaning: edam:data_2129
    title: File format name
  edam:data_2131:
    text: edam:data_2131
    description: Name of a computer operating system such as Linux, PC or Mac.
    meaning: edam:data_2131
    title: Operating system name
  edam:data_2133:
    text: edam:data_2133
    description: A logical operator such as OR, AND, XOR, and NOT.
    meaning: edam:data_2133
    title: Logical operator
  edam:data_2137:
    text: edam:data_2137
    description: A penalty for introducing or extending a gap in an alignment.
    meaning: edam:data_2137
    title: Gap penalty
  edam:data_2139:
    text: edam:data_2139
    description: A temperature concerning nucleic acid denaturation, typically the
      temperature at which the two strands of a hybridised or double stranded nucleic
      acid (DNA or RNA/DNA) molecule separate.
    meaning: edam:data_2139
    title: Nucleic acid melting temperature
  edam:data_2140:
    text: edam:data_2140
    description: The concentration of a chemical compound.
    meaning: edam:data_2140
    title: Concentration
  edam:data_2154:
    text: edam:data_2154
    description: Any arbitrary name of a molecular sequence.
    meaning: edam:data_2154
    title: Sequence name
  edam:data_2160:
    text: edam:data_2160
    description: A plot of Fickett testcode statistic (identifying protein coding
      regions) in a nucleotide sequences.
    meaning: edam:data_2160
    title: Fickett testcode plot
  edam:data_2161:
    text: edam:data_2161
    description: 'A plot of sequence similarities identified from word-matching or
      character comparison.

      Use this concept for calculated substitution rates, relative site variability,
      data on sites with biased properties, highly conserved or very poorly conserved
      sites, regions, blocks etc.'
    meaning: edam:data_2161
    title: Sequence similarity plot
  edam:data_2162:
    text: edam:data_2162
    description: An image of peptide sequence sequence looking down the axis of the
      helix for highlighting amphipathicity and other properties.
    meaning: edam:data_2162
    title: Helical wheel
  edam:data_2163:
    text: edam:data_2163
    description: 'An image of peptide sequence sequence in a simple 3,4,3,4 repeating
      pattern that emulates at a simple level the arrangement of residues around an
      alpha helix.

      Useful for highlighting amphipathicity and other properties.'
    meaning: edam:data_2163
    title: Helical net
  edam:data_2165:
    text: edam:data_2165
    description: A plot of pK versus pH for a protein.
    meaning: edam:data_2165
    title: Protein ionisation curve
  edam:data_2166:
    text: edam:data_2166
    description: A plot of character or word composition / frequency of a molecular
      sequence.
    meaning: edam:data_2166
    title: Sequence composition plot
  edam:data_2167:
    text: edam:data_2167
    description: Density plot (of base composition) for a nucleotide sequence.
    meaning: edam:data_2167
    title: Nucleic acid density plot
  edam:data_2168:
    text: edam:data_2168
    description: Image of a sequence trace (nucleotide sequence versus probabilities
      of each of the 4 bases).
    meaning: edam:data_2168
    title: Sequence trace image
  edam:data_2174:
    text: edam:data_2174
    description: 'Secondary identifier are used to handle entries that were merged
      with or split from other entries in the database.

      Secondary identifier of an object from the FlyBase database.'
    meaning: edam:data_2174
    title: FlyBase secondary identifier
  edam:data_2190:
    text: edam:data_2190
    description: A fixed-size datum calculated (by using a hash function) for a molecular
      sequence, typically for purposes of error detection or indexing.
    meaning: edam:data_2190
    title: Sequence checksum
  edam:data_2193:
    text: edam:data_2193
    description: Basic information on any arbitrary database entry.
    meaning: edam:data_2193
    title: Database entry metadata
  edam:data_2208:
    text: edam:data_2208
    description: An identifier of a plasmid in a database.
    meaning: edam:data_2208
    title: Plasmid identifier
  edam:data_2209:
    text: edam:data_2209
    description: A unique identifier of a specific mutation catalogued in a database.
    meaning: edam:data_2209
    title: Mutation ID
  edam:data_2216:
    text: edam:data_2216
    description: The number of a codon, for instance, at which a mutation is located.
    meaning: edam:data_2216
    title: Codon number
  edam:data_2219:
    text: edam:data_2219
    description: The name of a field in a database.
    meaning: edam:data_2219
    title: Database field name
  edam:data_2220:
    text: edam:data_2220
    description: Unique identifier of a sequence cluster from the SYSTERS database.
    meaning: edam:data_2220
    title: Sequence cluster ID (SYSTERS)
  edam:data_2223:
    text: edam:data_2223
    description: Data concerning a biological ontology.
    meaning: edam:data_2223
    title: Ontology metadata
  edam:data_2253:
    text: edam:data_2253
    description: The name of a data type.
    meaning: edam:data_2253
    title: Data resource definition name
  edam:data_2254:
    text: edam:data_2254
    description: Name of an OBO file format such as OBO-XML, plain and so on.
    meaning: edam:data_2254
    title: OBO file format name
  edam:data_2285:
    text: edam:data_2285
    description: Identifier for genetic elements in MIPS database.
    meaning: edam:data_2285
    title: Gene ID (MIPS)
  edam:data_2290:
    text: edam:data_2290
    description: An accession number of an entry from the EMBL sequence database.
    meaning: edam:data_2290
    title: EMBL accession
  edam:data_2291:
    text: edam:data_2291
    description: An identifier of a polypeptide in the UniProt database.
    meaning: edam:data_2291
    title: UniProt ID
  edam:data_2292:
    text: edam:data_2292
    description: Accession number of an entry from the GenBank sequence database.
    meaning: edam:data_2292
    title: GenBank accession
  edam:data_2293:
    text: edam:data_2293
    description: Secondary (internal) identifier of a Gramene database entry.
    meaning: edam:data_2293
    title: Gramene secondary identifier
  edam:data_2294:
    text: edam:data_2294
    description: An identifier of an entry from a database of molecular sequence variation.
    meaning: edam:data_2294
    title: Sequence variation ID
  edam:data_2295:
    text: edam:data_2295
    description: A unique (and typically persistent) identifier of a gene in a database,
      that is (typically) different to the gene name/symbol.
    meaning: edam:data_2295
    title: Gene ID
  edam:data_2297:
    text: edam:data_2297
    description: Identifier of an E. coli K-12 gene from EcoGene Database.
    meaning: edam:data_2297
    title: Gene ID (ECK)
  edam:data_2298:
    text: edam:data_2298
    description: Identifier for a gene approved by the HUGO Gene Nomenclature Committee.
    meaning: edam:data_2298
    title: Gene ID (HGNC)
  edam:data_2299:
    text: edam:data_2299
    description: The name of a gene, (typically) assigned by a person and/or according
      to a naming scheme. It may contain white space characters and is typically more
      intuitive and readable than a gene symbol. It (typically) may be used to identify
      similar genes in different species and to derive a gene symbol.
    meaning: edam:data_2299
    title: Gene name
  edam:data_2301:
    text: edam:data_2301
    description: A specification of a chemical structure in SMILES format.
    meaning: edam:data_2301
    title: SMILES string
  edam:data_2302:
    text: edam:data_2302
    description: Unique identifier of an entry from the STRING database of protein-protein
      interactions.
    meaning: edam:data_2302
    title: STRING ID
  edam:data_2309:
    text: edam:data_2309
    description: Identifier of a biological reaction from the SABIO-RK reactions database.
    meaning: edam:data_2309
    title: Reaction ID (SABIO-RK)
  edam:data_2313:
    text: edam:data_2313
    description: A human-readable collection of information about one or more specific
      carbohydrate 3D structure(s).
    meaning: edam:data_2313
    title: Carbohydrate report
  edam:data_2314:
    text: edam:data_2314
    description: 'A series of digits that are assigned consecutively to each sequence
      record processed by NCBI. The GI number bears no resemblance to the Accession
      number of the sequence record.

      Nucleotide sequence GI number is shown in the VERSION field of the database
      record. Protein sequence GI number is shown in the CDS/db_xref field of a nucleotide
      database record, and the VERSION field of a protein database record.'
    meaning: edam:data_2314
    title: GI number
  edam:data_2315:
    text: edam:data_2315
    description: 'An identifier assigned to sequence records processed by NCBI, made
      of the accession number of the database record followed by a dot and a version
      number.

      Nucleotide sequence version contains two letters followed by six digits, a dot,
      and a version number (or for older nucleotide sequence records, the format is
      one letter followed by five digits, a dot, and a version number). Protein sequence
      version contains three letters followed by five digits, a dot, and a version
      number.'
    meaning: edam:data_2315
    title: NCBI version
  edam:data_2316:
    text: edam:data_2316
    description: The name of a cell line.
    meaning: edam:data_2316
    title: Cell line name
  edam:data_2317:
    text: edam:data_2317
    description: The exact name of a cell line.
    meaning: edam:data_2317
    title: Cell line name (exact)
  edam:data_2318:
    text: edam:data_2318
    description: The truncated name of a cell line.
    meaning: edam:data_2318
    title: Cell line name (truncated)
  edam:data_2319:
    text: edam:data_2319
    description: The name of a cell line without any punctuation.
    meaning: edam:data_2319
    title: Cell line name (no punctuation)
  edam:data_2320:
    text: edam:data_2320
    description: The assonant name of a cell line.
    meaning: edam:data_2320
    title: Cell line name (assonant)
  edam:data_2321:
    text: edam:data_2321
    description: A unique, persistent identifier of an enzyme.
    meaning: edam:data_2321
    title: Enzyme ID
  edam:data_2325:
    text: edam:data_2325
    description: Identifier of an enzyme from the REBASE enzymes database.
    meaning: edam:data_2325
    title: REBASE enzyme number
  edam:data_2326:
    text: edam:data_2326
    description: Unique identifier of a drug from the DrugBank database.
    meaning: edam:data_2326
    title: DrugBank ID
  edam:data_2327:
    text: edam:data_2327
    description: 'A unique identifier assigned to NCBI protein sequence records.

      Nucleotide sequence GI number is shown in the VERSION field of the database
      record. Protein sequence GI number is shown in the CDS/db_xref field of a nucleotide
      database record, and the VERSION field of a protein database record.'
    meaning: edam:data_2327
    title: GI number (protein)
  edam:data_2335:
    text: edam:data_2335
    description: 'A score derived from the alignment of two sequences, which is then
      normalised with respect to the scoring system.

      Bit scores are normalised with respect to the scoring system and therefore can
      be used to compare alignment scores from different searches.'
    meaning: edam:data_2335
    title: Bit score
  edam:data_2337:
    text: edam:data_2337
    description: 'Data concerning or describing some core computational resource,
      as distinct from primary data. This includes metadata on the origin, source,
      history, ownership or location of some thing.

      This is a broad data type and is used a placeholder for other, more specific
      types.'
    meaning: edam:data_2337
    title: Resource metadata
  edam:data_2338:
    text: edam:data_2338
    description: Any arbitrary identifier of an ontology.
    meaning: edam:data_2338
    title: Ontology identifier
  edam:data_2339:
    text: edam:data_2339
    description: The name of a concept in an ontology.
    meaning: edam:data_2339
    title: Ontology concept name
  edam:data_2340:
    text: edam:data_2340
    description: An identifier of a build of a particular genome.
    meaning: edam:data_2340
    title: Genome build identifier
  edam:data_2342:
    text: edam:data_2342
    description: The name of a biological pathway or network.
    meaning: edam:data_2342
    title: Pathway or network name
  edam:data_2343:
    text: edam:data_2343
    description: Identifier of a pathway from the KEGG pathway database.
    meaning: edam:data_2343
    title: Pathway ID (KEGG)
  edam:data_2344:
    text: edam:data_2344
    description: Identifier of a pathway from the NCI-Nature pathway database.
    meaning: edam:data_2344
    title: Pathway ID (NCI-Nature)
  edam:data_2345:
    text: edam:data_2345
    description: Identifier of a pathway from the ConsensusPathDB pathway database.
    meaning: edam:data_2345
    title: Pathway ID (ConsensusPathDB)
  edam:data_2346:
    text: edam:data_2346
    description: Unique identifier of an entry from the UniRef database.
    meaning: edam:data_2346
    title: Sequence cluster ID (UniRef)
  edam:data_2347:
    text: edam:data_2347
    description: Unique identifier of an entry from the UniRef100 database.
    meaning: edam:data_2347
    title: Sequence cluster ID (UniRef100)
  edam:data_2348:
    text: edam:data_2348
    description: Unique identifier of an entry from the UniRef90 database.
    meaning: edam:data_2348
    title: Sequence cluster ID (UniRef90)
  edam:data_2349:
    text: edam:data_2349
    description: Unique identifier of an entry from the UniRef50 database.
    meaning: edam:data_2349
    title: Sequence cluster ID (UniRef50)
  edam:data_2353:
    text: edam:data_2353
    description: 'Data concerning or derived from an ontology.

      This is a broad data type and is used a placeholder for other, more specific
      types.'
    meaning: edam:data_2353
    title: Ontology data
  edam:data_2354:
    text: edam:data_2354
    description: A human-readable collection of information about a specific RNA family
      or other group of classified RNA sequences.
    meaning: edam:data_2354
    title: RNA family report
  edam:data_2355:
    text: edam:data_2355
    description: Identifier of an RNA family, typically an entry from a RNA sequence
      classification database.
    meaning: edam:data_2355
    title: RNA family identifier
  edam:data_2356:
    text: edam:data_2356
    description: Stable accession number of an entry (RNA family) from the RFAM database.
    meaning: edam:data_2356
    title: RFAM accession
  edam:data_2362:
    text: edam:data_2362
    description: Accession number of a nucleotide or protein sequence database entry.
    meaning: edam:data_2362
    title: Sequence accession (hybrid)
  edam:data_2365:
    text: edam:data_2365
    description: A persistent, unique identifier of a biological pathway or network
      (typically a database entry).
    meaning: edam:data_2365
    title: Pathway or network accession
  edam:data_2366:
    text: edam:data_2366
    description: Alignment of the (1D representations of) secondary structure of two
      or more molecules.
    meaning: edam:data_2366
    title: Secondary structure alignment
  edam:data_2367:
    text: edam:data_2367
    description: Identifier of an object from the ASTD database.
    meaning: edam:data_2367
    title: ASTD ID
  edam:data_2368:
    text: edam:data_2368
    description: Identifier of an exon from the ASTD database.
    meaning: edam:data_2368
    title: ASTD ID (exon)
  edam:data_2369:
    text: edam:data_2369
    description: Identifier of an intron from the ASTD database.
    meaning: edam:data_2369
    title: ASTD ID (intron)
  edam:data_2370:
    text: edam:data_2370
    description: Identifier of a polyA signal from the ASTD database.
    meaning: edam:data_2370
    title: ASTD ID (polya)
  edam:data_2371:
    text: edam:data_2371
    description: Identifier of a transcription start site from the ASTD database.
    meaning: edam:data_2371
    title: ASTD ID (tss)
  edam:data_2373:
    text: edam:data_2373
    description: Unique identifier of a spot from a two-dimensional (protein) gel.
    meaning: edam:data_2373
    title: Spot ID
  edam:data_2374:
    text: edam:data_2374
    description: Unique identifier of a spot from a two-dimensional (protein) gel
      in the SWISS-2DPAGE database.
    meaning: edam:data_2374
    title: Spot serial number
  edam:data_2375:
    text: edam:data_2375
    description: Unique identifier of a spot from a two-dimensional (protein) gel
      from a HSC-2DPAGE database.
    meaning: edam:data_2375
    title: Spot ID (HSC-2DPAGE)
  edam:data_2379:
    text: edam:data_2379
    description: Identifier of a strain of an organism variant, typically a plant,
      virus or bacterium.
    meaning: edam:data_2379
    title: Strain identifier
  edam:data_2380:
    text: edam:data_2380
    description: A unique identifier of an item from the CABRI database.
    meaning: edam:data_2380
    title: CABRI accession
  edam:data_2382:
    text: edam:data_2382
    description: Identifier of an entry from a database of genotype experiment metadata.
    meaning: edam:data_2382
    title: Genotype experiment ID
  edam:data_2383:
    text: edam:data_2383
    description: Identifier of an entry from the EGA database.
    meaning: edam:data_2383
    title: EGA accession
  edam:data_2384:
    text: edam:data_2384
    description: Identifier of a protein entry catalogued in the International Protein
      Index (IPI) database.
    meaning: edam:data_2384
    title: IPI protein ID
  edam:data_2385:
    text: edam:data_2385
    description: Accession number of a protein from the RefSeq database.
    meaning: edam:data_2385
    title: RefSeq accession (protein)
  edam:data_2386:
    text: edam:data_2386
    description: Identifier of an entry (promoter) from the EPD database.
    meaning: edam:data_2386
    title: EPD ID
  edam:data_2387:
    text: edam:data_2387
    description: Identifier of an entry from the TAIR database.
    meaning: edam:data_2387
    title: TAIR accession
  edam:data_2388:
    text: edam:data_2388
    description: Identifier of an Arabidopsis thaliana gene from the TAIR database.
    meaning: edam:data_2388
    title: TAIR accession (At gene)
  edam:data_2389:
    text: edam:data_2389
    description: Identifier of an entry from the UniSTS database.
    meaning: edam:data_2389
    title: UniSTS accession
  edam:data_2390:
    text: edam:data_2390
    description: Identifier of an entry from the UNITE database.
    meaning: edam:data_2390
    title: UNITE accession
  edam:data_2391:
    text: edam:data_2391
    description: Identifier of an entry from the UTR database.
    meaning: edam:data_2391
    title: UTR accession
  edam:data_2392:
    text: edam:data_2392
    description: Accession number of a UniParc (protein sequence) database entry.
    meaning: edam:data_2392
    title: UniParc accession
  edam:data_2393:
    text: edam:data_2393
    description: Identifier of an entry from the Rouge or HUGE databases.
    meaning: edam:data_2393
    title: mFLJ/mKIAA number
  edam:data_2398:
    text: edam:data_2398
    description: Unique identifier for a protein from the Ensembl database.
    meaning: edam:data_2398
    title: Ensembl protein ID
  edam:data_2523:
    text: edam:data_2523
    description: 'Data concerning phylogeny, typically of molecular sequences, including
      reports of information concerning or derived from a phylogenetic tree, or from
      comparing two or more phylogenetic trees.

      This is a broad data type and is used a placeholder for other, more specific
      types.'
    meaning: edam:data_2523
    title: Phylogenetic data
  edam:data_2526:
    text: edam:data_2526
    description: 'Data concerning, extracted from, or derived from the analysis of
      a scientific text (or texts) such as a full text article from a scientific journal.

      This is a broad data type and is used a placeholder for other, more specific
      types. It is primarily intended to help navigation of EDAM and would not typically
      be used for annotation. It includes concepts that are best described as scientific
      text or closely concerned with or derived from text.'
    meaning: edam:data_2526
    title: Text data
  edam:data_2530:
    text: edam:data_2530
    description: A human-readable collection of information about a specific organism.
    meaning: edam:data_2530
    title: Organism report
  edam:data_2531:
    text: edam:data_2531
    description: A human-readable collection of information about about how a scientific
      experiment or analysis was carried out that results in a specific set of data
      or results used for further analysis or to test a specific hypothesis.
    meaning: edam:data_2531
    title: Protocol
  edam:data_2534:
    text: edam:data_2534
    description: An attribute of a molecular sequence, possibly in reference to some
      other sequence.
    meaning: edam:data_2534
    title: Sequence attribute
  edam:data_2535:
    text: edam:data_2535
    description: 'Output from a serial analysis of gene expression (SAGE), massively
      parallel signature sequencing (MPSS) or sequencing by synthesis (SBS) experiment.
      In all cases this is a list of short sequence tags and the number of times it
      is observed.

      SAGE, MPSS and SBS experiments are usually performed to study gene expression.
      The sequence tags are typically subsequently annotated (after a database search)
      with the mRNA (and therefore gene) the tag was extracted from.

      This includes tag to gene assignments (tag mapping) of SAGE, MPSS and SBS data.
      Typically this is the sequencing-based expression profile annotated with gene
      identifiers.'
    meaning: edam:data_2535
    title: Sequence tag profile
  edam:data_2536:
    text: edam:data_2536
    description: Data concerning a mass spectrometry measurement.
    meaning: edam:data_2536
    title: Mass spectrometry data
  edam:data_2537:
    text: edam:data_2537
    description: 'Raw data from experimental methods for determining protein structure.

      This is a broad data type and is used a placeholder for other, more specific
      types. It is primarily intended to help navigation of EDAM and would not typically
      be used for annotation.'
    meaning: edam:data_2537
    title: Protein structure raw data
  edam:data_2538:
    text: edam:data_2538
    description: An identifier of a mutation.
    meaning: edam:data_2538
    title: Mutation identifier
  edam:data_2563:
    text: edam:data_2563
    description: Single letter amino acid identifier, e.g. G.
    meaning: edam:data_2563
    title: Amino acid name (single letter)
  edam:data_2564:
    text: edam:data_2564
    description: Three letter amino acid identifier, e.g. GLY.
    meaning: edam:data_2564
    title: Amino acid name (three letter)
  edam:data_2565:
    text: edam:data_2565
    description: Full name of an amino acid, e.g. Glycine.
    meaning: edam:data_2565
    title: Amino acid name (full name)
  edam:data_2576:
    text: edam:data_2576
    description: Identifier of a toxin.
    meaning: edam:data_2576
    title: Toxin identifier
  edam:data_2578:
    text: edam:data_2578
    description: Unique identifier of a toxin from the ArachnoServer database.
    meaning: edam:data_2578
    title: ArachnoServer ID
  edam:data_2580:
    text: edam:data_2580
    description: Unique identifier of a monomer from the BindingDB database.
    meaning: edam:data_2580
    title: BindingDB Monomer ID
  edam:data_2582:
    text: edam:data_2582
    description: An identifier of a 'biological process' concept from the the Gene
      Ontology.
    meaning: edam:data_2582
    title: GO concept ID (biological process)
  edam:data_2583:
    text: edam:data_2583
    description: An identifier of a 'molecular function' concept from the the Gene
      Ontology.
    meaning: edam:data_2583
    title: GO concept ID (molecular function)
  edam:data_2586:
    text: edam:data_2586
    description: An image arising from a Northern Blot experiment.
    meaning: edam:data_2586
    title: Northern blot image
  edam:data_2587:
    text: edam:data_2587
    description: Unique identifier of a blot from a Northern Blot.
    meaning: edam:data_2587
    title: Blot ID
  edam:data_2588:
    text: edam:data_2588
    description: Unique identifier of a blot from a Northern Blot from the BlotBase
      database.
    meaning: edam:data_2588
    title: BlotBase blot ID
  edam:data_2589:
    text: edam:data_2589
    description: Raw data on a biological hierarchy, describing the hierarchy proper,
      hierarchy components and possibly associated annotation.
    meaning: edam:data_2589
    title: Hierarchy
  edam:data_2591:
    text: edam:data_2591
    description: Identifier of an entry from the Brite database of biological hierarchies.
    meaning: edam:data_2591
    title: Brite hierarchy ID
  edam:data_2593:
    text: edam:data_2593
    description: A unique identifier for an organism used in the BRENDA database.
    meaning: edam:data_2593
    title: BRENDA organism ID
  edam:data_2594:
    text: edam:data_2594
    description: The name of a taxon using the controlled vocabulary of the UniGene
      database.
    meaning: edam:data_2594
    title: UniGene taxon
  edam:data_2595:
    text: edam:data_2595
    description: The name of a taxon using the controlled vocabulary of the UTRdb
      database.
    meaning: edam:data_2595
    title: UTRdb taxon
  edam:data_2596:
    text: edam:data_2596
    description: An identifier of a catalogue of biological resources.
    meaning: edam:data_2596
    title: Catalogue ID
  edam:data_2597:
    text: edam:data_2597
    description: The name of a catalogue of biological resources from the CABRI database.
    meaning: edam:data_2597
    title: CABRI catalogue name
  edam:data_2600:
    text: edam:data_2600
    description: Primary data about a specific biological pathway or network (the
      nodes and connections within the pathway or network).
    meaning: edam:data_2600
    title: Pathway or network
  edam:data_2603:
    text: edam:data_2603
    description: Image, hybridisation or some other data arising from a study of feature/molecule
      expression, typically profiling or quantification.
    meaning: edam:data_2603
    title: Expression data
  edam:data_2605:
    text: edam:data_2605
    description: Unique identifier of a chemical compound from the KEGG database.
    meaning: edam:data_2605
    title: Compound ID (KEGG)
  edam:data_2606:
    text: edam:data_2606
    description: Name (not necessarily stable) an entry (RNA family) from the RFAM
      database.
    meaning: edam:data_2606
    title: RFAM name
  edam:data_2608:
    text: edam:data_2608
    description: Identifier of a biological reaction from the KEGG reactions database.
    meaning: edam:data_2608
    title: Reaction ID (KEGG)
  edam:data_2609:
    text: edam:data_2609
    description: Unique identifier of a drug from the KEGG Drug database.
    meaning: edam:data_2609
    title: Drug ID (KEGG)
  edam:data_2610:
    text: edam:data_2610
    description: Identifier of an entry (exon, gene, transcript or protein) from the
      Ensembl database.
    meaning: edam:data_2610
    title: Ensembl ID
  edam:data_2611:
    text: edam:data_2611
    description: An identifier of a disease from the International Classification
      of Diseases (ICD) database.
    meaning: edam:data_2611
    title: ICD identifier
  edam:data_2612:
    text: edam:data_2612
    description: Unique identifier of a sequence cluster from the CluSTr database.
    meaning: edam:data_2612
    title: Sequence cluster ID (CluSTr)
  edam:data_2613:
    text: edam:data_2613
    description: Unique identifier of a glycan ligand from the KEGG GLYCAN database
      (a subset of KEGG LIGAND).
    meaning: edam:data_2613
    title: KEGG Glycan ID
  edam:data_2614:
    text: edam:data_2614
    description: 'A unique identifier of a family from the transport classification
      database (TCDB) of membrane transport proteins.

      OBO file for regular expression.'
    meaning: edam:data_2614
    title: TCDB ID
  edam:data_2615:
    text: edam:data_2615
    description: Unique identifier of an entry from the MINT database of protein-protein
      interactions.
    meaning: edam:data_2615
    title: MINT ID
  edam:data_2616:
    text: edam:data_2616
    description: Unique identifier of an entry from the DIP database of protein-protein
      interactions.
    meaning: edam:data_2616
    title: DIP ID
  edam:data_2617:
    text: edam:data_2617
    description: Unique identifier of a protein listed in the UCSD-Nature Signaling
      Gateway Molecule Pages database.
    meaning: edam:data_2617
    title: Signaling Gateway protein ID
  edam:data_2618:
    text: edam:data_2618
    description: Identifier of a protein modification catalogued in a database.
    meaning: edam:data_2618
    title: Protein modification ID
  edam:data_2619:
    text: edam:data_2619
    description: Identifier of a protein modification catalogued in the RESID database.
    meaning: edam:data_2619
    title: RESID ID
  edam:data_2620:
    text: edam:data_2620
    description: Identifier of an entry from the RGD database.
    meaning: edam:data_2620
    title: RGD ID
  edam:data_2621:
    text: edam:data_2621
    description: Identifier of a protein sequence from the TAIR database.
    meaning: edam:data_2621
    title: TAIR accession (protein)
  edam:data_2622:
    text: edam:data_2622
    description: Identifier of a small molecule metabolite from the Human Metabolome
      Database (HMDB).
    meaning: edam:data_2622
    title: Compound ID (HMDB)
  edam:data_2625:
    text: edam:data_2625
    description: Identifier of an entry from the LIPID MAPS database.
    meaning: edam:data_2625
    title: LIPID MAPS ID
  edam:data_2626:
    text: edam:data_2626
    description: Identifier of a peptide from the PeptideAtlas peptide databases.
    meaning: edam:data_2626
    title: PeptideAtlas ID
  edam:data_2628:
    text: edam:data_2628
    description: A unique identifier of an interaction from the BioGRID database.
    meaning: edam:data_2628
    title: BioGRID interaction ID
  edam:data_2629:
    text: edam:data_2629
    description: Unique identifier of a peptidase enzyme from the MEROPS database.
    meaning: edam:data_2629
    title: Enzyme ID (MEROPS)
  edam:data_2630:
    text: edam:data_2630
    description: An identifier of a mobile genetic element.
    meaning: edam:data_2630
    title: Mobile genetic element ID
  edam:data_2631:
    text: edam:data_2631
    description: An identifier of a mobile genetic element from the Aclame database.
    meaning: edam:data_2631
    title: ACLAME ID
  edam:data_2632:
    text: edam:data_2632
    description: Identifier of an entry from the Saccharomyces genome database (SGD).
    meaning: edam:data_2632
    title: SGD ID
  edam:data_2633:
    text: edam:data_2633
    description: Unique identifier of a book.
    meaning: edam:data_2633
    title: Book ID
  edam:data_2634:
    text: edam:data_2634
    description: The International Standard Book Number (ISBN) is for identifying
      printed books.
    meaning: edam:data_2634
    title: ISBN
  edam:data_2635:
    text: edam:data_2635
    description: Identifier of a metabolite from the 3DMET database.
    meaning: edam:data_2635
    title: Compound ID (3DMET)
  edam:data_2636:
    text: edam:data_2636
    description: A unique identifier of an interaction from the MatrixDB database.
    meaning: edam:data_2636
    title: MatrixDB interaction ID
  edam:data_2637:
    text: edam:data_2637
    description: 'A unique identifier for pathways, reactions, complexes and small
      molecules from the cPath (Pathway Commons) database.

      These identifiers are unique within the cPath database, however, they are not
      stable between releases.'
    meaning: edam:data_2637
    title: cPath ID
  edam:data_2638:
    text: edam:data_2638
    description: Identifier of an assay from the PubChem database.
    meaning: edam:data_2638
    title: PubChem bioassay ID
  edam:data_2639:
    text: edam:data_2639
    description: Identifier of an entry from the PubChem database.
    meaning: edam:data_2639
    title: PubChem ID
  edam:data_2641:
    text: edam:data_2641
    description: Identifier of an enzyme reaction mechanism from the MACie database.
    meaning: edam:data_2641
    title: Reaction ID (MACie)
  edam:data_2642:
    text: edam:data_2642
    description: Identifier for a gene from the miRBase database.
    meaning: edam:data_2642
    title: Gene ID (miRBase)
  edam:data_2643:
    text: edam:data_2643
    description: Identifier for a gene from the Zebrafish information network genome
      (ZFIN) database.
    meaning: edam:data_2643
    title: Gene ID (ZFIN)
  edam:data_2644:
    text: edam:data_2644
    description: Identifier of an enzyme-catalysed reaction from the Rhea database.
    meaning: edam:data_2644
    title: Reaction ID (Rhea)
  edam:data_2645:
    text: edam:data_2645
    description: Identifier of a biological pathway from the Unipathway database.
    meaning: edam:data_2645
    title: Pathway ID (Unipathway)
  edam:data_2646:
    text: edam:data_2646
    description: Identifier of a small molecular from the ChEMBL database.
    meaning: edam:data_2646
    title: Compound ID (ChEMBL)
  edam:data_2647:
    text: edam:data_2647
    description: Unique identifier of an entry from the Ligand-gated ion channel (LGICdb)
      database.
    meaning: edam:data_2647
    title: LGICdb identifier
  edam:data_2648:
    text: edam:data_2648
    description: Identifier of a biological reaction (kinetics entry) from the SABIO-RK
      reactions database.
    meaning: edam:data_2648
    title: Reaction kinetics ID (SABIO-RK)
  edam:data_2649:
    text: edam:data_2649
    description: Identifier of an entry from the pharmacogenetics and pharmacogenomics
      knowledge base (PharmGKB).
    meaning: edam:data_2649
    title: PharmGKB ID
  edam:data_2650:
    text: edam:data_2650
    description: Identifier of a pathway from the pharmacogenetics and pharmacogenomics
      knowledge base (PharmGKB).
    meaning: edam:data_2650
    title: Pathway ID (PharmGKB)
  edam:data_2651:
    text: edam:data_2651
    description: Identifier of a disease from the pharmacogenetics and pharmacogenomics
      knowledge base (PharmGKB).
    meaning: edam:data_2651
    title: Disease ID (PharmGKB)
  edam:data_2652:
    text: edam:data_2652
    description: Identifier of a drug from the pharmacogenetics and pharmacogenomics
      knowledge base (PharmGKB).
    meaning: edam:data_2652
    title: Drug ID (PharmGKB)
  edam:data_2653:
    text: edam:data_2653
    description: Identifier of a drug from the Therapeutic Target Database (TTD).
    meaning: edam:data_2653
    title: Drug ID (TTD)
  edam:data_2654:
    text: edam:data_2654
    description: Identifier of a target protein from the Therapeutic Target Database
      (TTD).
    meaning: edam:data_2654
    title: Target ID (TTD)
  edam:data_2655:
    text: edam:data_2655
    description: A unique identifier of a type or group of cells.
    meaning: edam:data_2655
    title: Cell type identifier
  edam:data_2656:
    text: edam:data_2656
    description: A unique identifier of a neuron from the NeuronDB database.
    meaning: edam:data_2656
    title: NeuronDB ID
  edam:data_2657:
    text: edam:data_2657
    description: A unique identifier of a neuron from the NeuroMorpho database.
    meaning: edam:data_2657
    title: NeuroMorpho ID
  edam:data_2658:
    text: edam:data_2658
    description: Identifier of a chemical from the ChemIDplus database.
    meaning: edam:data_2658
    title: Compound ID (ChemIDplus)
  edam:data_2659:
    text: edam:data_2659
    description: Identifier of a pathway from the Small Molecule Pathway Database
      (SMPDB).
    meaning: edam:data_2659
    title: Pathway ID (SMPDB)
  edam:data_2660:
    text: edam:data_2660
    description: Identifier of an entry from the BioNumbers database of key numbers
      and associated data in molecular biology.
    meaning: edam:data_2660
    title: BioNumbers ID
  edam:data_2662:
    text: edam:data_2662
    description: Unique identifier of a toxin from the Toxin and Toxin Target Database
      (T3DB) database.
    meaning: edam:data_2662
    title: T3DB ID
  edam:data_2663:
    text: edam:data_2663
    description: Identifier of a carbohydrate.
    meaning: edam:data_2663
    title: Carbohydrate identifier
  edam:data_2664:
    text: edam:data_2664
    description: Identifier of an entry from the GlycomeDB database.
    meaning: edam:data_2664
    title: GlycomeDB ID
  edam:data_2665:
    text: edam:data_2665
    description: Identifier of an entry from the LipidBank database.
    meaning: edam:data_2665
    title: LipidBank ID
  edam:data_2666:
    text: edam:data_2666
    description: Identifier of a conserved domain from the Conserved Domain Database.
    meaning: edam:data_2666
    title: CDD ID
  edam:data_2667:
    text: edam:data_2667
    description: An identifier of an entry from the MMDB database.
    meaning: edam:data_2667
    title: MMDB ID
  edam:data_2668:
    text: edam:data_2668
    description: Unique identifier of an entry from the iRefIndex database of protein-protein
      interactions.
    meaning: edam:data_2668
    title: iRefIndex ID
  edam:data_2669:
    text: edam:data_2669
    description: Unique identifier of an entry from the ModelDB database.
    meaning: edam:data_2669
    title: ModelDB ID
  edam:data_2670:
    text: edam:data_2670
    description: Identifier of a signaling pathway from the Database of Quantitative
      Cellular Signaling (DQCS).
    meaning: edam:data_2670
    title: Pathway ID (DQCS)
  edam:data_2700:
    text: edam:data_2700
    description: Identifier of a protein domain (or other node) from the CATH database.
    meaning: edam:data_2700
    title: CATH identifier
  edam:data_2701:
    text: edam:data_2701
    description: A code number identifying a family from the CATH database.
    meaning: edam:data_2701
    title: CATH node ID (family)
  edam:data_2702:
    text: edam:data_2702
    description: Identifier of an enzyme from the CAZy enzymes database.
    meaning: edam:data_2702
    title: Enzyme ID (CAZy)
  edam:data_2704:
    text: edam:data_2704
    description: A unique identifier assigned by the I.M.A.G.E. consortium to a clone
      (cloned molecular sequence).
    meaning: edam:data_2704
    title: Clone ID (IMAGE)
  edam:data_2705:
    text: edam:data_2705
    description: An identifier of a 'cellular component' concept from the Gene Ontology.
    meaning: edam:data_2705
    title: GO concept ID (cellular component)
  edam:data_2706:
    text: edam:data_2706
    description: Name of a chromosome as used in the BioCyc database.
    meaning: edam:data_2706
    title: Chromosome name (BioCyc)
  edam:data_2709:
    text: edam:data_2709
    description: An identifier of a gene expression profile from the CleanEx database.
    meaning: edam:data_2709
    title: CleanEx entry name
  edam:data_2710:
    text: edam:data_2710
    description: An identifier of (typically a list of) gene expression experiments
      catalogued in the CleanEx database.
    meaning: edam:data_2710
    title: CleanEx dataset code
  edam:data_2711:
    text: edam:data_2711
    description: A human-readable collection of information concerning a genome as
      a whole.
    meaning: edam:data_2711
    title: Genome report
  edam:data_2713:
    text: edam:data_2713
    description: Unique identifier for a protein complex from the CORUM database.
    meaning: edam:data_2713
    title: Protein ID (CORUM)
  edam:data_2714:
    text: edam:data_2714
    description: Unique identifier of a position-specific scoring matrix from the
      CDD database.
    meaning: edam:data_2714
    title: CDD PSSM-ID
  edam:data_2715:
    text: edam:data_2715
    description: Unique identifier for a protein from the CuticleDB database.
    meaning: edam:data_2715
    title: Protein ID (CuticleDB)
  edam:data_2716:
    text: edam:data_2716
    description: Identifier of a predicted transcription factor from the DBD database.
    meaning: edam:data_2716
    title: DBD ID
  edam:data_2717:
    text: edam:data_2717
    description: General annotation on an oligonucleotide probe, or a set of probes.
    meaning: edam:data_2717
    title: Oligonucleotide probe annotation
  edam:data_2718:
    text: edam:data_2718
    description: Identifier of an oligonucleotide from a database.
    meaning: edam:data_2718
    title: Oligonucleotide ID
  edam:data_2719:
    text: edam:data_2719
    description: Identifier of an oligonucleotide probe from the dbProbe database.
    meaning: edam:data_2719
    title: dbProbe ID
  edam:data_2720:
    text: edam:data_2720
    description: Physicochemical property data for one or more dinucleotides.
    meaning: edam:data_2720
    title: Dinucleotide property
  edam:data_2721:
    text: edam:data_2721
    description: Identifier of an dinucleotide property from the DiProDB database.
    meaning: edam:data_2721
    title: DiProDB ID
  edam:data_2723:
    text: edam:data_2723
    description: Unique identifier for a protein from the DisProt database.
    meaning: edam:data_2723
    title: Protein ID (DisProt)
  edam:data_2725:
    text: edam:data_2725
    description: Unique identifier for a gene transcript from the Ensembl database.
    meaning: edam:data_2725
    title: Ensembl transcript ID
  edam:data_2727:
    text: edam:data_2727
    description: An identifier of a promoter of a gene that is catalogued in a database.
    meaning: edam:data_2727
    title: Promoter ID
  edam:data_2728:
    text: edam:data_2728
    description: Identifier of an EST sequence.
    meaning: edam:data_2728
    title: EST accession
  edam:data_2729:
    text: edam:data_2729
    description: Identifier of an EST sequence from the COGEME database.
    meaning: edam:data_2729
    title: COGEME EST ID
  edam:data_2730:
    text: edam:data_2730
    description: 'A unisequence is a single sequence assembled from ESTs.

      Identifier of a unisequence from the COGEME database.'
    meaning: edam:data_2730
    title: COGEME unisequence ID
  edam:data_2731:
    text: edam:data_2731
    description: Accession number of an entry (protein family) from the GeneFarm database.
    meaning: edam:data_2731
    title: Protein family ID (GeneFarm)
  edam:data_2732:
    text: edam:data_2732
    description: The name of a family of organism.
    meaning: edam:data_2732
    title: Family name
  edam:data_2736:
    text: edam:data_2736
    description: 'A feature identifier as used in the SwissRegulon database.

      This can be name of a gene, the ID of a TFBS, or genomic coordinates in form
      "chr:start..end".'
    meaning: edam:data_2736
    title: Sequence feature ID (SwissRegulon)
  edam:data_2737:
    text: edam:data_2737
    description: 'A FIG ID consists of four parts: a prefix, genome id, locus type
      and id number.

      A unique identifier of gene in the NMPDR database.'
    meaning: edam:data_2737
    title: FIG ID
  edam:data_2738:
    text: edam:data_2738
    description: A unique identifier of gene in the Xenbase database.
    meaning: edam:data_2738
    title: Gene ID (Xenbase)
  edam:data_2739:
    text: edam:data_2739
    description: A unique identifier of gene in the Genolist database.
    meaning: edam:data_2739
    title: Gene ID (Genolist)
  edam:data_2741:
    text: edam:data_2741
    description: Identifier of an entry (promoter) from the ABS database.
    meaning: edam:data_2741
    title: ABS ID
  edam:data_2742:
    text: edam:data_2742
    description: Identifier of a transcription factor from the AraC-XylS database.
    meaning: edam:data_2742
    title: AraC-XylS ID
  edam:data_2744:
    text: edam:data_2744
    description: Identifier of a locus from the PseudoCAP database.
    meaning: edam:data_2744
    title: Locus ID (PseudoCAP)
  edam:data_2745:
    text: edam:data_2745
    description: Identifier of a locus from the UTR database.
    meaning: edam:data_2745
    title: Locus ID (UTR)
  edam:data_2746:
    text: edam:data_2746
    description: Unique identifier of a monosaccharide from the MonosaccharideDB database.
    meaning: edam:data_2746
    title: MonosaccharideDB ID
  edam:data_2749:
    text: edam:data_2749
    description: An identifier of a particular genome.
    meaning: edam:data_2749
    title: Genome identifier
  edam:data_2752:
    text: edam:data_2752
    description: Identifier of an entry from the GlycoMapsDB (Glycosciences.de) database.
    meaning: edam:data_2752
    title: GlycoMap ID
  edam:data_2753:
    text: edam:data_2753
    description: A conformational energy map of the glycosidic linkages in a carbohydrate
      molecule.
    meaning: edam:data_2753
    title: Carbohydrate conformational map
  edam:data_2755:
    text: edam:data_2755
    description: The name of a transcription factor.
    meaning: edam:data_2755
    title: Transcription factor name
  edam:data_2756:
    text: edam:data_2756
    description: Identifier of a membrane transport proteins from the transport classification
      database (TCDB).
    meaning: edam:data_2756
    title: TCID
  edam:data_2757:
    text: edam:data_2757
    description: Name of a domain from the Pfam database.
    meaning: edam:data_2757
    title: Pfam domain name
  edam:data_2758:
    text: edam:data_2758
    description: Accession number of a Pfam clan.
    meaning: edam:data_2758
    title: Pfam clan ID
  edam:data_2759:
    text: edam:data_2759
    description: Identifier for a gene from the VectorBase database.
    meaning: edam:data_2759
    title: Gene ID (VectorBase)
  edam:data_2761:
    text: edam:data_2761
    description: Identifier of an entry from the UTRSite database of regulatory motifs
      in eukaryotic UTRs.
    meaning: edam:data_2761
    title: UTRSite ID
  edam:data_2762:
    text: edam:data_2762
    description: An informative report about a specific or conserved pattern in a
      molecular sequence, such as its context in genes or proteins, its role, origin
      or method of construction, etc.
    meaning: edam:data_2762
    title: Sequence signature report
  edam:data_2764:
    text: edam:data_2764
    description: Official name of a protein as used in the UniProt database.
    meaning: edam:data_2764
    title: Protein name (UniProt)
  edam:data_2766:
    text: edam:data_2766
    description: Name of a protein family from the HAMAP database.
    meaning: edam:data_2766
    title: HAMAP ID
  edam:data_2769:
    text: edam:data_2769
    description: Identifier of a RNA transcript.
    meaning: edam:data_2769
    title: Transcript ID
  edam:data_2770:
    text: edam:data_2770
    description: Identifier of an RNA transcript from the H-InvDB database.
    meaning: edam:data_2770
    title: HIT ID
  edam:data_2771:
    text: edam:data_2771
    description: A unique identifier of gene cluster in the H-InvDB database.
    meaning: edam:data_2771
    title: HIX ID
  edam:data_2772:
    text: edam:data_2772
    description: Identifier of a antibody from the HPA database.
    meaning: edam:data_2772
    title: HPA antibody id
  edam:data_2773:
    text: edam:data_2773
    description: Identifier of a human major histocompatibility complex (HLA) or other
      protein from the IMGT/HLA database.
    meaning: edam:data_2773
    title: IMGT/HLA ID
  edam:data_2774:
    text: edam:data_2774
    description: A unique identifier of gene assigned by the J. Craig Venter Institute
      (JCVI).
    meaning: edam:data_2774
    title: Gene ID (JCVI)
  edam:data_2775:
    text: edam:data_2775
    description: The name of a kinase protein.
    meaning: edam:data_2775
    title: Kinase name
  edam:data_2776:
    text: edam:data_2776
    description: Identifier of a physical entity from the ConsensusPathDB database.
    meaning: edam:data_2776
    title: ConsensusPathDB entity ID
  edam:data_2777:
    text: edam:data_2777
    description: Name of a physical entity from the ConsensusPathDB database.
    meaning: edam:data_2777
    title: ConsensusPathDB entity name
  edam:data_2778:
    text: edam:data_2778
    description: The number of a strain of algae and protozoa from the CCAP database.
    meaning: edam:data_2778
    title: CCAP strain number
  edam:data_2779:
    text: edam:data_2779
    description: An identifier of stock from a catalogue of biological resources.
    meaning: edam:data_2779
    title: Stock number
  edam:data_2780:
    text: edam:data_2780
    description: A stock number from The Arabidopsis information resource (TAIR).
    meaning: edam:data_2780
    title: Stock number (TAIR)
  edam:data_2781:
    text: edam:data_2781
    description: Identifier of an entry from the RNA editing database (REDIdb).
    meaning: edam:data_2781
    title: REDIdb ID
  edam:data_2782:
    text: edam:data_2782
    description: Name of a domain from the SMART database.
    meaning: edam:data_2782
    title: SMART domain name
  edam:data_2783:
    text: edam:data_2783
    description: Accession number of an entry (family) from the PANTHER database.
    meaning: edam:data_2783
    title: Protein family ID (PANTHER)
  edam:data_2784:
    text: edam:data_2784
    description: 'A unique identifier for a virus from the RNAVirusDB database.

      Could list (or reference) other taxa here from https://www.phenoscape.org/wiki/Taxonomic_Rank_Vocabulary.'
    meaning: edam:data_2784
    title: RNAVirusDB ID
  edam:data_2785:
    text: edam:data_2785
    description: An accession of annotation on a (group of) viruses (catalogued in
      a database).
    meaning: edam:data_2785
    title: Virus identifier
  edam:data_2786:
    text: edam:data_2786
    description: An identifier of a genome project assigned by NCBI.
    meaning: edam:data_2786
    title: NCBI Genome Project ID
  edam:data_2787:
    text: edam:data_2787
    description: A unique identifier of a whole genome assigned by the NCBI.
    meaning: edam:data_2787
    title: NCBI genome accession
  edam:data_2789:
    text: edam:data_2789
    description: Unique identifier for a membrane protein from the TopDB database.
    meaning: edam:data_2789
    title: Protein ID (TopDB)
  edam:data_2790:
    text: edam:data_2790
    description: Identifier of a two-dimensional (protein) gel.
    meaning: edam:data_2790
    title: Gel ID
  edam:data_2791:
    text: edam:data_2791
    description: Name of a reference map gel from the SWISS-2DPAGE database.
    meaning: edam:data_2791
    title: Reference map name (SWISS-2DPAGE)
  edam:data_2792:
    text: edam:data_2792
    description: Unique identifier for a peroxidase protein from the PeroxiBase database.
    meaning: edam:data_2792
    title: Protein ID (PeroxiBase)
  edam:data_2793:
    text: edam:data_2793
    description: Identifier of an entry from the SISYPHUS database of tertiary structure
      alignments.
    meaning: edam:data_2793
    title: SISYPHUS ID
  edam:data_2794:
    text: edam:data_2794
    description: Accession of an open reading frame (catalogued in a database).
    meaning: edam:data_2794
    title: ORF ID
  edam:data_2795:
    text: edam:data_2795
    description: An identifier of an open reading frame.
    meaning: edam:data_2795
    title: ORF identifier
  edam:data_2796:
    text: edam:data_2796
    description: Identifier of an entry from the GlycosciencesDB database.
    meaning: edam:data_2796
    title: LINUCS ID
  edam:data_2797:
    text: edam:data_2797
    description: Unique identifier for a ligand-gated ion channel protein from the
      LGICdb database.
    meaning: edam:data_2797
    title: Protein ID (LGICdb)
  edam:data_2798:
    text: edam:data_2798
    description: Identifier of an EST sequence from the MaizeDB database.
    meaning: edam:data_2798
    title: MaizeDB ID
  edam:data_2799:
    text: edam:data_2799
    description: A unique identifier of gene in the MfunGD database.
    meaning: edam:data_2799
    title: Gene ID (MfunGD)
  edam:data_2800:
    text: edam:data_2800
    description: An identifier of a disease from the Orpha database.
    meaning: edam:data_2800
    title: Orpha number
  edam:data_2802:
    text: edam:data_2802
    description: Unique identifier for a protein from the EcID database.
    meaning: edam:data_2802
    title: Protein ID (EcID)
  edam:data_2803:
    text: edam:data_2803
    description: A unique identifier of a cDNA molecule catalogued in the RefSeq database.
    meaning: edam:data_2803
    title: Clone ID (RefSeq)
  edam:data_2804:
    text: edam:data_2804
    description: Unique identifier for a cone snail toxin protein from the ConoServer
      database.
    meaning: edam:data_2804
    title: Protein ID (ConoServer)
  edam:data_2805:
    text: edam:data_2805
    description: Identifier of a GeneSNP database entry.
    meaning: edam:data_2805
    title: GeneSNP ID
  edam:data_2812:
    text: edam:data_2812
    description: Identifier of a lipid.
    meaning: edam:data_2812
    title: Lipid identifier
  edam:data_2835:
    text: edam:data_2835
    description: Identifier for a gene from the VBASE2 database.
    meaning: edam:data_2835
    title: Gene ID (VBASE2)
  edam:data_2836:
    text: edam:data_2836
    description: A unique identifier for a virus from the DPVweb database.
    meaning: edam:data_2836
    title: DPVweb ID
  edam:data_2837:
    text: edam:data_2837
    description: Identifier of a pathway from the BioSystems pathway database.
    meaning: edam:data_2837
    title: Pathway ID (BioSystems)
  edam:data_2849:
    text: edam:data_2849
    description: An abstract of a scientific article.
    meaning: edam:data_2849
    title: Abstract
  edam:data_2850:
    text: edam:data_2850
    description: 3D coordinate and associated data for a lipid structure.
    meaning: edam:data_2850
    title: Lipid structure
  edam:data_2851:
    text: edam:data_2851
    description: 3D coordinate and associated data for the (3D) structure of a drug.
    meaning: edam:data_2851
    title: Drug structure
  edam:data_2852:
    text: edam:data_2852
    description: 3D coordinate and associated data for the (3D) structure of a toxin.
    meaning: edam:data_2852
    title: Toxin structure
  edam:data_2854:
    text: edam:data_2854
    description: A simple matrix of numbers, where each value (or column of values)
      is derived derived from analysis of the corresponding position in a sequence
      alignment.
    meaning: edam:data_2854
    title: Position-specific scoring matrix
  edam:data_2855:
    text: edam:data_2855
    description: A matrix of distances between molecular entities, where a value (distance)
      is (typically) derived from comparison of two entities and reflects their similarity.
    meaning: edam:data_2855
    title: Distance matrix
  edam:data_2856:
    text: edam:data_2856
    description: Distances (values representing similarity) between a group of molecular
      structures.
    meaning: edam:data_2856
    title: Structural distance matrix
  edam:data_2858:
    text: edam:data_2858
    description: 'A concept from a biological ontology.

      This includes any fields from the concept definition such as concept name, definition,
      comments and so on.'
    meaning: edam:data_2858
    title: Ontology concept
  edam:data_2865:
    text: edam:data_2865
    description: A numerical measure of differences in the frequency of occurrence
      of synonymous codons in DNA sequences.
    meaning: edam:data_2865
    title: Codon usage bias
  edam:data_2870:
    text: edam:data_2870
    description: 'A map showing distance between genetic markers estimated by radiation-induced
      breaks in a chromosome.

      The radiation method can break very closely linked markers providing a more
      detailed map. Most genetic markers and subsequences may be located to a defined
      map position and with a more precise estimates of distance than a linkage map.'
    meaning: edam:data_2870
    title: Radiation hybrid map
  edam:data_2872:
    text: edam:data_2872
    description: A simple list of data identifiers (such as database accessions),
      possibly with additional basic information on the addressed data.
    meaning: edam:data_2872
    title: ID list
  edam:data_2873:
    text: edam:data_2873
    description: Gene frequencies data that may be read during phylogenetic tree calculation.
    meaning: edam:data_2873
    title: Phylogenetic gene frequencies data
  edam:data_2877:
    text: edam:data_2877
    description: 3D coordinate and associated data for a multi-protein complex; two
      or more polypeptides chains in a stable, functional association with one another.
    meaning: edam:data_2877
    title: Protein complex
  edam:data_2878:
    text: edam:data_2878
    description: 3D coordinate and associated data for a protein (3D) structural motif;
      any group of contiguous or non-contiguous amino acid residues but typically
      those forming a feature with a structural or functional role.
    meaning: edam:data_2878
    title: Protein structural motif
  edam:data_2879:
    text: edam:data_2879
    description: A human-readable collection of information about one or more specific
      lipid 3D structure(s).
    meaning: edam:data_2879
    title: Lipid report
  edam:data_2884:
    text: edam:data_2884
    description: Biological data that has been plotted as a graph of some type, or
      plotting instructions for rendering such a graph.
    meaning: edam:data_2884
    title: Plot
  edam:data_2886:
    text: edam:data_2886
    description: A protein sequence and associated metadata.
    meaning: edam:data_2886
    title: Protein sequence record
  edam:data_2887:
    text: edam:data_2887
    description: A nucleic acid sequence and associated metadata.
    meaning: edam:data_2887
    title: Nucleic acid sequence record
  edam:data_2891:
    text: edam:data_2891
    description: Accession of a mathematical model, typically an entry from a database.
    meaning: edam:data_2891
    title: Biological model accession
  edam:data_2892:
    text: edam:data_2892
    description: The name of a type or group of cells.
    meaning: edam:data_2892
    title: Cell type name
  edam:data_2893:
    text: edam:data_2893
    description: Accession of a type or group of cells (catalogued in a database).
    meaning: edam:data_2893
    title: Cell type accession
  edam:data_2894:
    text: edam:data_2894
    description: Accession of an entry from a database of chemicals.
    meaning: edam:data_2894
    title: Compound accession
  edam:data_2895:
    text: edam:data_2895
    description: Accession of a drug.
    meaning: edam:data_2895
    title: Drug accession
  edam:data_2896:
    text: edam:data_2896
    description: Name of a toxin.
    meaning: edam:data_2896
    title: Toxin name
  edam:data_2897:
    text: edam:data_2897
    description: Accession of a toxin (catalogued in a database).
    meaning: edam:data_2897
    title: Toxin accession
  edam:data_2898:
    text: edam:data_2898
    description: Accession of a monosaccharide (catalogued in a database).
    meaning: edam:data_2898
    title: Monosaccharide accession
  edam:data_2899:
    text: edam:data_2899
    description: Common name of a drug.
    meaning: edam:data_2899
    title: Drug name
  edam:data_2900:
    text: edam:data_2900
    description: Accession of an entry from a database of carbohydrates.
    meaning: edam:data_2900
    title: Carbohydrate accession
  edam:data_2901:
    text: edam:data_2901
    description: Accession of a specific molecule (catalogued in a database).
    meaning: edam:data_2901
    title: Molecule accession
  edam:data_2902:
    text: edam:data_2902
    description: Accession of a data definition (catalogued in a database).
    meaning: edam:data_2902
    title: Data resource definition accession
  edam:data_2903:
    text: edam:data_2903
    description: An accession of a particular genome (in a database).
    meaning: edam:data_2903
    title: Genome accession
  edam:data_2904:
    text: edam:data_2904
    description: An accession of a map of a molecular sequence (deposited in a database).
    meaning: edam:data_2904
    title: Map accession
  edam:data_2905:
    text: edam:data_2905
    description: Accession of an entry from a database of lipids.
    meaning: edam:data_2905
    title: Lipid accession
  edam:data_2906:
    text: edam:data_2906
    description: Accession of a peptide deposited in a database.
    meaning: edam:data_2906
    title: Peptide ID
  edam:data_2907:
    text: edam:data_2907
    description: Accession of a protein deposited in a database.
    meaning: edam:data_2907
    title: Protein accession
  edam:data_2908:
    text: edam:data_2908
    description: An accession of annotation on a (group of) organisms (catalogued
      in a database).
    meaning: edam:data_2908
    title: Organism accession
  edam:data_2909:
    text: edam:data_2909
    description: The name of an organism (or group of organisms).
    meaning: edam:data_2909
    title: Organism name
  edam:data_2910:
    text: edam:data_2910
    description: Accession of a protein family (that is deposited in a database).
    meaning: edam:data_2910
    title: Protein family accession
  edam:data_2911:
    text: edam:data_2911
    description: Accession of an entry from a database of transcription factors or
      binding sites.
    meaning: edam:data_2911
    title: Transcription factor accession
  edam:data_2912:
    text: edam:data_2912
    description: Accession number of a strain of an organism variant, typically a
      plant, virus or bacterium.
    meaning: edam:data_2912
    title: Strain accession
  edam:data_2914:
    text: edam:data_2914
    description: Metadata on sequence features.
    meaning: edam:data_2914
    title: Sequence features metadata
  edam:data_2915:
    text: edam:data_2915
    description: Identifier of a Gramene database entry.
    meaning: edam:data_2915
    title: Gramene identifier
  edam:data_2916:
    text: edam:data_2916
    description: An identifier of an entry from the DDBJ sequence database.
    meaning: edam:data_2916
    title: DDBJ accession
  edam:data_2917:
    text: edam:data_2917
    description: An identifier of an entity from the ConsensusPathDB database.
    meaning: edam:data_2917
    title: ConsensusPathDB identifier
  edam:data_2955:
    text: edam:data_2955
    description: An informative report of information about molecular sequence(s),
      including basic information (metadata), and reports generated from molecular
      sequence analysis, including positional features and non-positional properties.
    meaning: edam:data_2955
    title: Sequence report
  edam:data_2956:
    text: edam:data_2956
    description: Data concerning the properties or features of one or more protein
      secondary structures.
    meaning: edam:data_2956
    title: Protein secondary structure
  edam:data_2957:
    text: edam:data_2957
    description: A Hopp and Woods plot of predicted antigenicity of a peptide or protein.
    meaning: edam:data_2957
    title: Hopp and Woods plot
  edam:data_2968:
    text: edam:data_2968
    description: Data (typically biological or biomedical) that has been rendered
      into an image, typically for display on screen.
    meaning: edam:data_2968
    title: Image
  edam:data_2969:
    text: edam:data_2969
    description: Image of a molecular sequence, possibly with sequence features or
      properties shown.
    meaning: edam:data_2969
    title: Sequence image
  edam:data_2970:
    text: edam:data_2970
    description: A report on protein properties concerning hydropathy.
    meaning: edam:data_2970
    title: Protein hydropathy data
  edam:data_2976:
    text: edam:data_2976
    description: One or more protein sequences, possibly with associated annotation.
    meaning: edam:data_2976
    title: Protein sequence
  edam:data_2977:
    text: edam:data_2977
    description: One or more nucleic acid sequences, possibly with associated annotation.
    meaning: edam:data_2977
    title: Nucleic acid sequence
  edam:data_2978:
    text: edam:data_2978
    description: 'Data concerning a biochemical reaction, typically data and more
      general annotation on the kinetics of enzyme-catalysed reaction.

      This is a broad data type and is used a placeholder for other, more specific
      types.'
    meaning: edam:data_2978
    title: Reaction data
  edam:data_2979:
    text: edam:data_2979
    description: Data concerning small peptides.
    meaning: edam:data_2979
    title: Peptide property
  edam:data_2984:
    text: edam:data_2984
    description: An informative report concerning or derived from the analysis of
      a biological pathway or network, such as a map (diagram) or annotation.
    meaning: edam:data_2984
    title: Pathway or network report
  edam:data_2985:
    text: edam:data_2985
    description: A thermodynamic or kinetic property of a nucleic acid molecule.
    meaning: edam:data_2985
    title: Nucleic acid thermodynamic data
  edam:data_2991:
    text: edam:data_2991
    description: Geometry data for a protein structure, for example bond lengths,
      bond angles, torsion angles, chiralities, planaraties etc.
    meaning: edam:data_2991
    title: Protein geometry data
  edam:data_2992:
    text: edam:data_2992
    description: An image of protein structure.
    meaning: edam:data_2992
    title: Protein structure image
  edam:data_2994:
    text: edam:data_2994
    description: Weights for sequence positions or characters in phylogenetic analysis
      where zero is defined as unweighted.
    meaning: edam:data_2994
    title: Phylogenetic character weights
  edam:data_3002:
    text: edam:data_3002
    description: Annotation of one particular positional feature on a biomolecular
      (typically genome) sequence, suitable for import and display in a genome browser.
    meaning: edam:data_3002
    title: Annotation track
  edam:data_3021:
    text: edam:data_3021
    description: Accession number of a UniProt (protein sequence) database entry.
    meaning: edam:data_3021
    title: UniProt accession
  edam:data_3022:
    text: edam:data_3022
    description: Identifier of a genetic code in the NCBI list of genetic codes.
    meaning: edam:data_3022
    title: NCBI genetic code ID
  edam:data_3025:
    text: edam:data_3025
    description: Identifier of a concept in an ontology of biological or bioinformatics
      concepts and relations.
    meaning: edam:data_3025
    title: Ontology concept identifier
  edam:data_3028:
    text: edam:data_3028
    description: 'Data concerning the classification, identification and naming of
      organisms.

      This is a broad data type and is used a placeholder for other, more specific
      types.'
    meaning: edam:data_3028
    title: Taxonomy
  edam:data_3029:
    text: edam:data_3029
    description: 'EMBL/GENBANK/DDBJ coding feature protein identifier, issued by International
      collaborators.

      This qualifier consists of a stable ID portion (3+5 format with 3 position letters
      and 5 numbers) plus a version number after the decimal point. When the protein
      sequence encoded by the CDS changes, only the version number of the /protein_id
      value is incremented; the stable part of the /protein_id remains unchanged and
      as a result will permanently be associated with a given protein; this qualifier
      is valid only on CDS features which translate into a valid protein.'
    meaning: edam:data_3029
    title: Protein ID (EMBL/GenBank/DDBJ)
  edam:data_3034:
    text: edam:data_3034
    description: Name or other identifier of molecular sequence feature(s).
    meaning: edam:data_3034
    title: Sequence feature identifier
  edam:data_3035:
    text: edam:data_3035
    description: An identifier of a molecular tertiary structure, typically an entry
      from a structure database.
    meaning: edam:data_3035
    title: Structure identifier
  edam:data_3036:
    text: edam:data_3036
    description: An identifier of an array of numerical values, such as a comparison
      matrix.
    meaning: edam:data_3036
    title: Matrix identifier
  edam:data_3103:
    text: edam:data_3103
    description: Unique identifier of a drug conforming to the Anatomical Therapeutic
      Chemical (ATC) Classification System, a drug classification system controlled
      by the WHO Collaborating Centre for Drug Statistics Methodology (WHOCC).
    meaning: edam:data_3103
    title: ATC code
  edam:data_3104:
    text: edam:data_3104
    description: A unique, unambiguous, alphanumeric identifier of a chemical substance
      as catalogued by the Substance Registration System of the Food and Drug Administration
      (FDA).
    meaning: edam:data_3104
    title: UNII
  edam:data_3106:
    text: edam:data_3106
    description: Metadata concerning the software, hardware or other aspects of a
      computer system.
    meaning: edam:data_3106
    title: System metadata
  edam:data_3108:
    text: edam:data_3108
    description: 'Raw data such as measurements or other results from laboratory experiments,
      as generated from laboratory hardware.

      This is a broad data type and is used a placeholder for other, more specific
      types. It is primarily intended to help navigation of EDAM and would not typically
      be used for annotation.'
    meaning: edam:data_3108
    title: Experimental measurement
  edam:data_3110:
    text: edam:data_3110
    description: 'Raw data (typically MIAME-compliant) for hybridisations from a microarray
      experiment.

      Such data as found in Affymetrix CEL or GPR files.'
    meaning: edam:data_3110
    title: Raw microarray data
  edam:data_3111:
    text: edam:data_3111
    description: 'Data generated from processing and analysis of probe set data from
      a microarray experiment.

      Such data as found in Affymetrix .CHP files or data from other software such
      as RMA or dChip.'
    meaning: edam:data_3111
    title: Processed microarray data
  edam:data_3112:
    text: edam:data_3112
    description: 'The final processed (normalised) data for a set of hybridisations
      in a microarray experiment.

      This combines data from all hybridisations.'
    meaning: edam:data_3112
    title: Gene expression matrix
  edam:data_3113:
    text: edam:data_3113
    description: 'Annotation on a biological sample, for example experimental factors
      and their values.

      This might include compound and dose in a dose response experiment.'
    meaning: edam:data_3113
    title: Sample annotation
  edam:data_3115:
    text: edam:data_3115
    description: 'Annotation on the array itself used in a microarray experiment.

      This might include gene identifiers, genomic coordinates, probe oligonucleotide
      sequences etc.'
    meaning: edam:data_3115
    title: Microarray metadata
  edam:data_3117:
    text: edam:data_3117
    description: Data concerning the hybridisations measured during a microarray experiment.
    meaning: edam:data_3117
    title: Microarray hybridisation data
  edam:data_3128:
    text: edam:data_3128
    description: 'A human-readable collection of information about regions within
      a nucleic acid sequence which form secondary or tertiary (3D) structures.

      The report may be based on analysis of nucleic acid sequence or structural data,
      or any annotation or information about specific nucleic acid 3D structure(s)
      or such structures in general.'
    meaning: edam:data_3128
    title: Nucleic acid structure report
  edam:data_3134:
    text: edam:data_3134
    description: 'An informative report on features of a messenger RNA (mRNA) molecules
      including precursor RNA, primary (unprocessed) transcript and fully processed
      molecules. This includes reports on a specific gene transcript, clone or EST.

      This includes 5''untranslated region (5''UTR), coding sequences (CDS), exons,
      intervening sequences (intron) and 3''untranslated regions (3''UTR).'
    meaning: edam:data_3134
    title: Gene transcript report
  edam:data_3148:
    text: edam:data_3148
    description: 'A human-readable collection of information about a particular family
      of genes, typically a set of genes with similar sequence that originate from
      duplication of a common ancestor gene, or any other classification of nucleic
      acid sequences or structures that reflects gene structure.

      This includes reports on on gene homologues between species.'
    meaning: edam:data_3148
    title: Gene family report
  edam:data_3153:
    text: edam:data_3153
    description: An image of a protein.
    meaning: edam:data_3153
    title: Protein image
  edam:data_3181:
    text: edam:data_3181
    description: 'An informative report about a DNA sequence assembly.

      This might include an overall quality assessment of the assembly and summary
      statistics including counts, average length and number of bases for reads, matches
      and non-matches, contigs, reads in pairs etc.'
    meaning: edam:data_3181
    title: Sequence assembly report
  edam:data_3210:
    text: edam:data_3210
    description: 'An index of a genome sequence.

      Many sequence alignment tasks involving many or very large sequences rely on
      a precomputed index of the sequence to accelerate the alignment.'
    meaning: edam:data_3210
    title: Genome index
  edam:data_3236:
    text: edam:data_3236
    description: 'Information might include start and end position in a chromosome
      sequence, chromosome identifier, name of band and so on.

      The position of a cytogenetic band in a genome.'
    meaning: edam:data_3236
    title: Cytoband position
  edam:data_3238:
    text: edam:data_3238
    description: Cell type ontology concept ID.
    meaning: edam:data_3238
    title: Cell type ontology ID
  edam:data_3241:
    text: edam:data_3241
    description: Mathematical model of a network, that contains biochemical kinetics.
    meaning: edam:data_3241
    title: Kinetic model
  edam:data_3264:
    text: edam:data_3264
    description: Identifier of a COSMIC database entry.
    meaning: edam:data_3264
    title: COSMIC ID
  edam:data_3265:
    text: edam:data_3265
    description: Identifier of a HGMD database entry.
    meaning: edam:data_3265
    title: HGMD ID
  edam:data_3266:
    text: edam:data_3266
    description: Unique identifier of sequence assembly.
    meaning: edam:data_3266
    title: Sequence assembly ID
  edam:data_3270:
    text: edam:data_3270
    description: Unique identifier for a gene tree from the Ensembl database.
    meaning: edam:data_3270
    title: Ensembl gene tree ID
  edam:data_3271:
    text: edam:data_3271
    description: A phylogenetic tree that is an estimate of the character's phylogeny.
    meaning: edam:data_3271
    title: Gene tree
  edam:data_3272:
    text: edam:data_3272
    description: A phylogenetic tree that reflects phylogeny of the taxa from which
      the characters (used in calculating the tree) were sampled.
    meaning: edam:data_3272
    title: Species tree
  edam:data_3273:
    text: edam:data_3273
    description: Name or other identifier of an entry from a biosample database.
    meaning: edam:data_3273
    title: Sample ID
  edam:data_3274:
    text: edam:data_3274
    description: Identifier of an object from the MGI database.
    meaning: edam:data_3274
    title: MGI accession
  edam:data_3275:
    text: edam:data_3275
    description: Name of a phenotype.
    meaning: edam:data_3275
    title: Phenotype name
  edam:data_3354:
    text: edam:data_3354
    description: 'A HMM transition matrix contains the probabilities of switching
      from one HMM state to another.

      Consider for example an HMM with two states (AT-rich and GC-rich). The transition
      matrix will hold the probabilities of switching from the AT-rich to the GC-rich
      state, and vica versa.'
    meaning: edam:data_3354
    title: Transition matrix
  edam:data_3355:
    text: edam:data_3355
    description: 'A HMM emission matrix holds the probabilities of choosing the four
      nucleotides (A, C, G and T) in each of the states of a HMM.

      Consider for example an HMM with two states (AT-rich and GC-rich). The emission
      matrix holds the probabilities of choosing each of the four nucleotides (A,
      C, G and T) in the AT-rich state and in the GC-rich state.'
    meaning: edam:data_3355
    title: Emission matrix
  edam:data_3358:
    text: edam:data_3358
    description: An identifier of a data format.
    meaning: edam:data_3358
    title: Format identifier
  edam:data_3424:
    text: edam:data_3424
    description: Raw biological or biomedical image generated by some experimental
      technique.
    meaning: edam:data_3424
    title: Raw image
  edam:data_3425:
    text: edam:data_3425
    description: Data concerning the intrinsic physical (e.g. structural) or chemical
      properties of one, more or all carbohydrates.
    meaning: edam:data_3425
    title: Carbohydrate property
  edam:data_3442:
    text: edam:data_3442
    description: An imaging technique that uses magnetic fields and radiowaves to
      form images, typically to investigate the anatomy and physiology of the human
      body.
    meaning: edam:data_3442
    title: MRI image
  edam:data_3449:
    text: edam:data_3449
    description: An image from a cell migration track assay.
    meaning: edam:data_3449
    title: Cell migration track image
  edam:data_3451:
    text: edam:data_3451
    description: Rate of association of a protein with another protein or some other
      molecule.
    meaning: edam:data_3451
    title: Rate of association
  edam:data_3479:
    text: edam:data_3479
    description: 'Multiple gene identifiers in a specific order.

      Such data are often used for genome rearrangement tools and phylogenetic tree
      labeling.'
    meaning: edam:data_3479
    title: Gene order
  edam:data_3483:
    text: edam:data_3483
    description: The spectrum of frequencies of electromagnetic radiation emitted
      from a molecule as a result of some spectroscopy experiment.
    meaning: edam:data_3483
    title: Spectrum
  edam:data_3488:
    text: edam:data_3488
    description: Spectral information for a molecule from a nuclear magnetic resonance
      experiment.
    meaning: edam:data_3488
    title: NMR spectrum
  edam:data_3492:
    text: edam:data_3492
    description: An informative report about a specific or conserved nucleic acid
      sequence pattern.
    meaning: edam:data_3492
    title: Nucleic acid signature
  edam:data_3494:
    text: edam:data_3494
    description: A DNA sequence.
    meaning: edam:data_3494
    title: DNA sequence
  edam:data_3495:
    text: edam:data_3495
    description: An RNA sequence.
    meaning: edam:data_3495
    title: RNA sequence
  edam:data_3498:
    text: edam:data_3498
    description: 'Data on gene sequence variations resulting large-scale genotyping
      and DNA sequencing projects.

      Variations are stored along with a reference genome.'
    meaning: edam:data_3498
    title: Sequence variations
  edam:data_3505:
    text: edam:data_3505
    description: A list of publications such as scientic papers or books.
    meaning: edam:data_3505
    title: Bibliography
  edam:data_3509:
    text: edam:data_3509
    description: A mapping of supplied textual terms or phrases to ontology concepts
      (URIs).
    meaning: edam:data_3509
    title: Ontology mapping
  edam:data_3546:
    text: edam:data_3546
    description: 'Any data concerning a specific biological or biomedical image.

      This can include basic provenance and technical information about the image,
      scientific annotation and so on.'
    meaning: edam:data_3546
    title: Image metadata
  edam:data_3558:
    text: edam:data_3558
    description: A human-readable collection of information concerning a clinical
      trial.
    meaning: edam:data_3558
    title: Clinical trial report
  edam:data_3567:
    text: edam:data_3567
    description: A report about a biosample.
    meaning: edam:data_3567
    title: Reference sample report
  edam:data_3568:
    text: edam:data_3568
    description: Accession number of an entry from the Gene Expression Atlas.
    meaning: edam:data_3568
    title: Gene Expression Atlas Experiment ID
  edam:data_3667:
    text: edam:data_3667
    description: Identifier of an entry from a database of disease.
    meaning: edam:data_3667
    title: Disease identifier
  edam:data_3668:
    text: edam:data_3668
    description: The name of some disease.
    meaning: edam:data_3668
    title: Disease name
  edam:data_3669:
    text: edam:data_3669
    description: Learning material is a document or another digital object that is
      designed for learning (educational, training) purposes.
    meaning: edam:data_3669
    title: Learning material
  edam:data_3670:
    text: edam:data_3670
    description: A training course available for use on the Web.
    meaning: edam:data_3670
    title: Online course
  edam:data_3671:
    text: edam:data_3671
    description: Any free or plain text, typically for human consumption and in English.
      Can instantiate also as a textual search query.
    meaning: edam:data_3671
    title: Text
  edam:data_3707:
    text: edam:data_3707
    description: Machine-readable biodiversity data.
    meaning: edam:data_3707
    title: Biodiversity data
  edam:data_3716:
    text: edam:data_3716
    description: A human-readable collection of information concerning biosafety data.
    meaning: edam:data_3716
    title: Biosafety report
  edam:data_3717:
    text: edam:data_3717
    description: A report about any kind of isolation of biological material.
    meaning: edam:data_3717
    title: Isolation report
  edam:data_3718:
    text: edam:data_3718
    description: Information about the ability of an organism to cause disease in
      a corresponding host.
    meaning: edam:data_3718
    title: Pathogenicity report
  edam:data_3719:
    text: edam:data_3719
    description: Information about the biosafety classification of an organism according
      to corresponding law.
    meaning: edam:data_3719
    title: Biosafety classification
  edam:data_3720:
    text: edam:data_3720
    description: A report about localisation of the isolaton of biological material
      e.g. country or coordinates.
    meaning: edam:data_3720
    title: Geographic location
  edam:data_3721:
    text: edam:data_3721
    description: A report about any kind of isolation source of biological material
      e.g. blood, water, soil.
    meaning: edam:data_3721
    title: Isolation source
  edam:data_3722:
    text: edam:data_3722
    description: Experimentally determined parameter of the physiology of an organism,
      e.g. substrate spectrum.
    meaning: edam:data_3722
    title: Physiology parameter
  edam:data_3723:
    text: edam:data_3723
    description: Experimentally determined parameter of the morphology of an organism,
      e.g. size & shape.
    meaning: edam:data_3723
    title: Morphology parameter
  edam:data_3724:
    text: edam:data_3724
    description: Experimental determined parameter for the cultivation of an organism.
    meaning: edam:data_3724
    title: Cultivation parameter
  edam:data_3732:
    text: edam:data_3732
    description: Data concerning a sequencing experiment, that may be specified as
      an input to some tool.
    meaning: edam:data_3732
    title: Sequencing metadata name
  edam:data_3733:
    text: edam:data_3733
    description: 'A flow cell is used to immobilise, amplify and sequence millions
      of molecules at once. In Illumina machines, a flowcell is composed of 8 "lanes"
      which allows 8 experiments in a single analysis.

      An identifier of a flow cell of a sequencing machine.'
    meaning: edam:data_3733
    title: Flow cell identifier
  edam:data_3734:
    text: edam:data_3734
    description: An identifier of a lane within a flow cell of a sequencing machine,
      within which millions of sequences are immobilised, amplified and sequenced.
    meaning: edam:data_3734
    title: Lane identifier
  edam:data_3735:
    text: edam:data_3735
    description: A number corresponding to the number of an analysis performed by
      a sequencing machine. For example, if it's the 13th analysis, the run is 13.
    meaning: edam:data_3735
    title: Run number
  edam:data_3736:
    text: edam:data_3736
    description: 'Data concerning ecology; for example measurements and reports from
      the study of interactions among organisms and their environment.

      This is a broad data type and is used a placeholder for other, more specific
      types.'
    meaning: edam:data_3736
    title: Ecological data
  edam:data_3737:
    text: edam:data_3737
    description: The mean species diversity in sites or habitats at a local scale.
    meaning: edam:data_3737
    title: Alpha diversity data
  edam:data_3738:
    text: edam:data_3738
    description: The ratio between regional and local species diversity.
    meaning: edam:data_3738
    title: Beta diversity data
  edam:data_3739:
    text: edam:data_3739
    description: The total species diversity in a landscape.
    meaning: edam:data_3739
    title: Gamma diversity data
  edam:data_3743:
    text: edam:data_3743
    description: A plot in which community data (e.g. species abundance data) is summarised.
      Similar species and samples are plotted close together, and dissimilar species
      and samples are plotted placed far apart.
    meaning: edam:data_3743
    title: Ordination plot
  edam:data_3753:
    text: edam:data_3753
    description: A ranked list of categories (usually ontology concepts), each associated
      with a statistical metric of over-/under-representation within the studied data.
    meaning: edam:data_3753
    title: Over-representation data
  edam:data_3754:
    text: edam:data_3754
    description: A ranked list of Gene Ontology concepts, each associated with a p-value,
      concerning or derived from the analysis of e.g. a set of genes or proteins.
    meaning: edam:data_3754
    title: GO-term enrichment data
  edam:data_3756:
    text: edam:data_3756
    description: Score for localization of one or more post-translational modifications
      in peptide sequence measured by mass spectrometry.
    meaning: edam:data_3756
    title: Localisation score
  edam:data_3757:
    text: edam:data_3757
    description: Identifier of a protein modification catalogued in the Unimod database.
    meaning: edam:data_3757
    title: Unimod ID
  edam:data_3759:
    text: edam:data_3759
    description: Identifier for mass spectrometry proteomics data in the proteomexchange.org
      repository.
    meaning: edam:data_3759
    title: ProteomeXchange ID
  edam:data_3768:
    text: edam:data_3768
    description: Groupings of expression profiles according to a clustering algorithm.
    meaning: edam:data_3768
    title: Clustered expression profiles
  edam:data_3769:
    text: edam:data_3769
    description: An identifier of a concept from the BRENDA ontology.
    meaning: edam:data_3769
    title: BRENDA ontology concept ID
  edam:data_3779:
    text: edam:data_3779
    description: A text (such as a scientific article), annotated with notes, data
      and metadata, such as recognised entities, concepts, and their relations.
    meaning: edam:data_3779
    title: Annotated text
  edam:data_3786:
    text: edam:data_3786
    description: A structured query, in form of a script, that defines a database
      search task.
    meaning: edam:data_3786
    title: Query script
  edam:data_3805:
    text: edam:data_3805
    description: Structural 3D model (volume map) from electron microscopy.
    meaning: edam:data_3805
    title: 3D EM Map
  edam:data_3806:
    text: edam:data_3806
    description: Annotation on a structural 3D EM Map from electron microscopy. This
      might include one or several locations in the map of the known features of a
      particular macromolecule.
    meaning: edam:data_3806
    title: 3D EM Mask
  edam:data_3807:
    text: edam:data_3807
    description: Raw DDD movie acquisition from electron microscopy.
    meaning: edam:data_3807
    title: EM Movie
  edam:data_3808:
    text: edam:data_3808
    description: Raw acquisition from electron microscopy or average of an aligned
      DDD movie.
    meaning: edam:data_3808
    title: EM Micrograph
  edam:data_3842:
    text: edam:data_3842
    description: 'Data coming from molecular simulations, computer "experiments" on
      model molecules.

      Typically formed by two separated but indivisible pieces of information: topology
      data (static) and trajectory data (dynamic).'
    meaning: edam:data_3842
    title: Molecular simulation data
  edam:data_3856:
    text: edam:data_3856
    description: 'Identifier of an entry from the RNA central database of annotated
      human miRNAs.

      There are canonical and taxon-specific forms of RNAcentral ID. Canonical form
      e.g. urs_9or10digits identifies an RNA sequence (within the RNA central database)
      which may appear in multiple sequences. Taxon-specific form identifies a sequence
      in the specific taxon (e.g. urs_9or10digits_taxonID).'
    meaning: edam:data_3856
    title: RNA central ID
  edam:data_3861:
    text: edam:data_3861
    description: A human-readable systematic collection of patient (or population)
      health information in a digital format.
    meaning: edam:data_3861
    title: Electronic health record
  edam:data_3869:
    text: edam:data_3869
    description: 'Data coming from molecular simulations, computer "experiments" on
      model molecules. Typically formed by two separated but indivisible pieces of
      information: topology data (static) and trajectory data (dynamic).'
    meaning: edam:data_3869
    title: Simulation
  edam:data_3870:
    text: edam:data_3870
    description: 'Dynamic information of a structure molecular system coming from
      a molecular simulation: XYZ 3D coordinates (sometimes with their associated
      velocities) for every atom along time.'
    meaning: edam:data_3870
    title: Trajectory data
  edam:data_3871:
    text: edam:data_3871
    description: 'Force field parameters: charges, masses, radii, bond lengths, bond
      dihedrals, etc. define the structural molecular system, and are essential for
      the proper description and simulation of a molecular system.'
    meaning: edam:data_3871
    title: Forcefield parameters
  edam:data_3872:
    text: edam:data_3872
    description: 'Static information of a structure molecular system that is needed
      for a molecular simulation: the list of atoms, their non-bonded parameters for
      Van der Waals and electrostatic interactions, and the complete connectivity
      in terms of bonds, angles and dihedrals.'
    meaning: edam:data_3872
    title: Topology data
  edam:data_3905:
    text: edam:data_3905
    description: Visualization of distribution of quantitative data, e.g. expression
      data, by histograms, violin plots and density plots.
    meaning: edam:data_3905
    title: Histogram
  edam:data_3914:
    text: edam:data_3914
    description: Report of the quality control review that was made of factors involved
      in a procedure.
    meaning: edam:data_3914
    title: Quality control report
  edam:data_3917:
    text: edam:data_3917
    description: A table of unnormalized values representing summarised read counts
      per genomic region (e.g. gene, transcript, peak).
    meaning: edam:data_3917
    title: Count matrix
  edam:data_3924:
    text: edam:data_3924
    description: Alignment (superimposition) of DNA tertiary (3D) structures.
    meaning: edam:data_3924
    title: DNA structure alignment
  edam:data_3932:
    text: edam:data_3932
    description: 'A score derived from the P-value to ensure correction for multiple
      tests. The Q-value provides an estimate of the positive False Discovery Rate
      (pFDR), i.e. the rate of false positives among all the cases reported positive:
      pFDR = FP / (FP + TP).

      Q-values are widely used in high-throughput data analysis (e.g. detection of
      differentially expressed genes from transcriptome data).'
    meaning: edam:data_3932
    title: Q-value
  edam:data_3949:
    text: edam:data_3949
    description: A profile HMM is a variant of a Hidden Markov model that is derived
      specifically from a set of (aligned) biological sequences. Profile HMMs provide
      the basis for a position-specific scoring system, which can be used to align
      sequences and search databases for related sequences.
    meaning: edam:data_3949
    title: Profile HMM
  edam:data_3952:
    text: edam:data_3952
    description: Identifier of a pathway from the WikiPathways pathway database.
    meaning: edam:data_3952
    title: Pathway ID (WikiPathways)
  edam:data_3953:
    text: edam:data_3953
    description: A ranked list of pathways, each associated with z-score, p-value
      or similar, concerning or derived from the analysis of e.g. a set of genes or
      proteins.
    meaning: edam:data_3953
    title: Pathway overrepresentation data
  edam:data_4022:
    text: edam:data_4022
    description: Identifier of a researcher registered with the ORCID database. Used
      to identify author IDs.
    meaning: edam:data_4022
    title: ORCID Identifier
  edam:data_4040:
    text: edam:data_4040
    description: Data management plan is a document describing the data management
      of a project or an organisation, including acquisition, reuse, structure, processing,
      storage, documentation, sharing, and preservation of data. This may include
      budgeting for these operations.
    meaning: edam:data_4040
    title: Data management plan
reachable_from:
  source_ontology: bioregistry:edam
  source_nodes:
  - edam:data_0006
  relationship_types:
  - rdfs:subClassOf
  is_direct: false
  include_self: false
  traverse_up: false